Pairwise Alignments

Query, 202 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 230 a.a., Electron transport complex protein RnfE from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 68.2 bits (165), Expect = 1e-16
 Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 16/166 (9%)

Query: 1   MEHYINLFIQATFLDNMALSFFLGMCTFLAVSKKVSTAFGLGVAVIVVMTLAVPLNQLIY 60
           M    ++ +Q  + +N AL   LG+C  LAV+   + A GLG+A  +V+TL         
Sbjct: 1   MSEIKDIVVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLT-------- 52

Query: 61  AKVLAPGALAWAGMPGIDLSYLQLITFIGVIAALVQILEMFLDKYIPSLYDSLGIFLPLL 120
             +       W        + +++  ++ +IA++V  ++M ++ Y   LY SLGIF+PL+
Sbjct: 53  -NLTVSALRRWTP------AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLI 105

Query: 121 TVNCAIFAGVIFMANRDYNFAESAVFAMGSGTGWALAIVMLAGLRE 166
             NC +       A +   +  SA+     G G   A+ +L  LRE
Sbjct: 106 VTNCIVVGRAEAFAAKKGPWL-SALDGFSIGMGATGAMFVLGSLRE 150