Pairwise Alignments

Query, 206 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 227 a.a., NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  184 bits (466), Expect = 1e-51
 Identities = 93/195 (47%), Positives = 137/195 (70%), Gaps = 8/195 (4%)

Query: 8   RDMLAGPVFANNPVAMQVLGVCSALAVSNSMQTAVVMTLAVTFVLVFSNLIISAIRNFIP 67
           + +++ P+  +NP+ +QVLG+CSALAV+  M+  +VM L+V FV+V SNL IS +RN IP
Sbjct: 24  KKLISDPLVDDNPITIQVLGICSALAVTTQMKPTLVMALSVIFVIVMSNLTISIMRNTIP 83

Query: 68  NSVRIIAQMTVIASLVIIVDMVLQDVAYELSKQLSVFVGLIITNCIIMGRAEAFAMKYPP 127
             VRII Q+ V+A+LV +V+ +L+  AY++ K+LSVFVGLIITNCI+MGR EAFA+   P
Sbjct: 84  TRVRIIVQLAVVATLVTLVNEILKAFAYDMYKELSVFVGLIITNCIVMGRLEAFALGNKP 143

Query: 128 HLAVVDAVGNAAGYGLVLISVAFVRELLGTGNLFGHSVLTTVENGGWY------LPNEMF 181
           + +V+D  G+A GY  ++++VAF REL G+G++FG  V  TV +  W+        N + 
Sbjct: 144 YDSVLDGFGSALGYSWIILTVAFFRELWGSGSVFGIPVFDTVSS--WFGEDFSLATNGLM 201

Query: 182 KLPPSAFFLIGLLIW 196
             P  AF ++GL+IW
Sbjct: 202 VSPVGAFIILGLIIW 216