Pairwise Alignments

Query, 264 a.a., NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 200 a.a., putative electron transport complex protein from Pseudomonas putida KT2440

 Score = 42.7 bits (99), Expect = 6e-09
 Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 14/109 (12%)

Query: 130 SGKLSSVVVPFYGKGLWSMIYGYVAVEPDFNTIKGVVVYEHGETPGIGDFVTDP--HWLS 187
           +GK S++++    +G    I   VA+  D   I G  V E  E+PG+GD + DP  HWLS
Sbjct: 84  AGKPSAIILITQAQGYAGPIVLSVAITTDGRLI-GSQVVEQQESPGLGDRLGDPRLHWLS 142

Query: 188 LWKGKQLFDDKGKFAMRLVKGGVKEGDIHGVDAVSGATMTGRGVQRAME 236
            +  +   D    +A++  +G          D ++GAT+T R V  A++
Sbjct: 143 QFNNR---DHGDHWALKRDQG--------DFDQLAGATVTSRAVIAALQ 180