Pairwise Alignments

Query, 264 a.a., NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 249 a.a., NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  105 bits (261), Expect = 1e-27
 Identities = 66/254 (25%), Positives = 129/254 (50%), Gaps = 27/254 (10%)

Query: 14  FTITLCLLCSFMITGTAGVL----KERKLAKKRDELQRYVLMAADVNLGQGNEFRDIFAK 69
           F++ L ++  F+++GT+ +L    KE      + ++   V+ A  +   +  E  + +  
Sbjct: 11  FSVILTVVLGFLLSGTSQLLGPIQKEAVALDNKKQILGAVMDAEKIAAMKPKEINEYYEN 70

Query: 70  SVKPLLINLDTGKVDSDANVLDFDERMAAINPETSSTPKKDIAKIKTRANDARVFKVF-- 127
           ++   ++N++  +V          E +             D+AK   +  + R++ V+  
Sbjct: 71  TISSKVVNINGEEVTEQEGTQVIAETV-------------DVAKNYKKPAEERLYPVYIY 117

Query: 128 ---DDSGKLSSVVVPFYGKGLWSMIYGYVAVEPDFNTIKGVVVYEHGETPGIGDFVTDPH 184
                  K+ + ++P YG GLW  I+GY+A++ D NTI+GV     GETPG+G  +T   
Sbjct: 118 HEEGSEDKVVAYILPLYGAGLWDSIWGYLALQTDLNTIEGVTFSHAGETPGLGARITSTE 177

Query: 185 WLSLWKGKQLFDDKGKF-AMRLVKGGVKE--GDIHGVDAVSGATMTGRGVQRAMEFWFGV 241
               ++GK++F D G+  A+ + KG  K+     H VD +SGAT+TG GV + ++ + G 
Sbjct: 178 VQQRYQGKEIFGDGGELEAVSMQKGEGKDYSSQPHKVDGMSGATITGEGVNKMLKNYLGY 237

Query: 242 EGFQTFFNQLKASA 255
             +Q++ +++K  +
Sbjct: 238 --YQSYMDKVKGKS 249