Pairwise Alignments

Query, 456 a.a., NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 449 a.a., Na(+)-translocating NADH-quinone reductase subunit A from Serratia liquefaciens MT49

 Score =  504 bits (1299), Expect = e-147
 Identities = 271/451 (60%), Positives = 320/451 (70%), Gaps = 4/451 (0%)

Query: 8   VITIKKGLDLPISGEPRQIIEPGNRPSQVALLGEEYVGLKPTMLVEVGDKVKKGQPLFED 67
           +I I+KGLDLPI+G P Q I  G     VALLGEEYVG++P+MLV+ GD VKKGQ LFED
Sbjct: 1   MIKIRKGLDLPIAGTPVQAIHDGPIIQHVALLGEEYVGMRPSMLVQEGDSVKKGQALFED 60

Query: 68  KKTKGVFFTAPASGEIVAINRGERRVLQSVVIRCNGLDADEQIRFDIH--ADLQSLSAQV 125
           KKT GVFFTAPASG IVAINRGERRVLQSVVI       DEQ+ F  +  A+L  L  + 
Sbjct: 61  KKTPGVFFTAPASGRIVAINRGERRVLQSVVIAIEN-GGDEQLEFAHYPMAELAMLPREQ 119

Query: 126 VQAQLVNSGLWTALRTRPFSRVPALDSKPAGIFVTAMDTNPLAADPRLIIAEQSDAFKAG 185
           V+++L+ SGLWTALRTRPFS+ P   + P  IFVTAMD+ PLAADP +II EQ  AF AG
Sbjct: 120 VESELIASGLWTALRTRPFSKTPVPGTTPRAIFVTAMDSQPLAADPLVIITEQLAAFNAG 179

Query: 186 LAVLSHLTDGKVYLCQDKGEALVGADLPKVEVRRFTGVHPAGLAGTHIHFTLPVSIERQV 245
           L+VL+ LTDGKV++C   G  L      +V    F G HPAGL GTHIHF  PVS+++ V
Sbjct: 180 LSVLARLTDGKVHVCHASGANLGKQPDAQVTYNEFAGPHPAGLVGTHIHFLEPVSLKKTV 239

Query: 246 WHIGYQDVIAYGKLFQTGELYTDRVVALGGPSVLNPRLLRTQLGAELSALVADEVKSGNN 305
           WHIGYQDVIA G LF TG+L TDRVVAL GP V  P+LLRT+LGA L  L A  +K+G N
Sbjct: 240 WHIGYQDVIAIGTLFTTGKLDTDRVVALAGPQVELPQLLRTRLGASLDELTAGRLKAGEN 299

Query: 306 RVVSGSVLSGHTAQGVHDFLGRFHNQISVLAEDAQHQVLPWVRGGSDKFSITRAVTSRLF 365
           RV+SGSVLSG    G + +LGRFH+Q+SVL E    Q+  W+    DKFSITR      F
Sbjct: 300 RVISGSVLSGTHVAGPNAYLGRFHSQVSVLEEGRDKQLFGWIAPSPDKFSITRTTLGH-F 358

Query: 366 GLTKSFEFTTHQGGSQRAMMAFGQLDRVMPLDILPTLLVRDLVVRDTDEAQALGALELDE 425
              K F F+T   G +RAM+  G  +RVMPLDILPTLL+RDL+  D+D AQALG LELDE
Sbjct: 359 LKNKLFAFSTTTHGGERAMVPIGNYERVMPLDILPTLLLRDLLAGDSDSAQALGCLELDE 418

Query: 426 EDLALCTFVCPGKYDFGKELRACLDVIEREG 456
           EDLALCTFVCPGKY++   LR  L  IE+EG
Sbjct: 419 EDLALCTFVCPGKYEYAPVLRDVLTKIEQEG 449