Pairwise Alignments

Query, 456 a.a., NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 444 a.a., NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  506 bits (1304), Expect = e-148
 Identities = 264/451 (58%), Positives = 325/451 (72%), Gaps = 9/451 (1%)

Query: 8   VITIKKGLDLPISGEPRQIIEPGNRPSQVALLGEEYVGLKPTMLVEVGDKVKKGQPLFED 67
           +ITIKKGL+LPI+G P Q+I  G     VA LGEEY+GL+PTM ++VGDKV+KGQ +FED
Sbjct: 1   MITIKKGLELPIAGGPEQVIHNGPAIKHVATLGEEYIGLRPTMKIKVGDKVQKGQVIFED 60

Query: 68  KKTKGVFFTAPASGEIVAINRGERRVLQSVVIRCNGLDADEQIRFDIHADLQSLSAQVVQ 127
           KK  GV +TA ASG I+ INRG +RVLQSVVI   G D+    ++D  A L +L AQ+V+
Sbjct: 61  KKNPGVKYTALASGTILDINRGAQRVLQSVVIEVEGNDSIAFAKYDATA-LDTLDAQLVR 119

Query: 128 AQLVNSGLWTALRTRPFSRVPALDSKPAGIFVTAMDTNPLAADPRLIIAEQSDAFKAGLA 187
             L+ SGLWTALRTRPFS+VPA+DS  AGIFVTA+DT P AADP ++I E  + F  GL 
Sbjct: 120 DNLIESGLWTALRTRPFSKVPAVDSSAAGIFVTAIDTQPHAADPVVVIREHKEDFANGLK 179

Query: 188 VLSHLTDGKVYLCQDKGEALVGADLP--KVEVRRFTGVHPAGLAGTHIHFTLPVSIERQV 245
           VL+ LT+ KVYLC+  G     AD+P    +V  F G+HPAGL GTHIHF LP S +R V
Sbjct: 180 VLARLTEDKVYLCKAPG-----ADIPAANAQVEEFAGIHPAGLVGTHIHFLLPASAKRTV 234

Query: 246 WHIGYQDVIAYGKLFQTGELYTDRVVALGGPSVLNPRLLRTQLGAELSALVADEVKSGNN 305
           WH+GYQDVIA G+LF TG+L+T+RVVA+ GP    PRL+RT LGA ++ L A E  +GN 
Sbjct: 235 WHVGYQDVIAIGQLFTTGQLHTERVVAIAGPKAAKPRLVRTVLGASMTELTAGETLAGNV 294

Query: 306 RVVSGSVLSGHTAQGVHDFLGRFHNQISVLAEDAQHQVLPWVRGGSDKFSITRAVTSRLF 365
           R +SGSVL+G TA G   +LGR+H Q+S+L E  + + L WV  G++KFSITRA     F
Sbjct: 295 RFISGSVLNGRTAIGPQGYLGRYHMQVSLLEEGTEKEFLGWVLPGANKFSITRAFLGH-F 353

Query: 366 GLTKSFEFTTHQGGSQRAMMAFGQLDRVMPLDILPTLLVRDLVVRDTDEAQALGALELDE 425
             ++ F  TT  GGS RAM+  G  +RVMPLDILPT+L+RDL+  D D A  LGALELDE
Sbjct: 354 SSSRLFNMTTSTGGSDRAMVPIGNYERVMPLDILPTMLLRDLISGDFDGAVTLGALELDE 413

Query: 426 EDLALCTFVCPGKYDFGKELRACLDVIEREG 456
           EDLALCTFVCPGKYD+G  LR CLD I REG
Sbjct: 414 EDLALCTFVCPGKYDYGSYLRDCLDTIVREG 444