Pairwise Alignments

Query, 568 a.a., amidase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 465 a.a., amidase from Rhodanobacter sp000427505 FW510-R12

 Score =  100 bits (250), Expect = 1e-25
 Identities = 82/249 (32%), Positives = 115/249 (46%), Gaps = 16/249 (6%)

Query: 3   EVTEVSIAELRAALESGRTTVVELVKSYLARVAAYDGPATETKLNALVVHNPDALKE-AE 61
           ++   S+ +L   L  GR     L   Y   +   D       L+A V      L++ AE
Sbjct: 11  DLRRASLCQLLHWLAVGRVQPQALADVYQQAIERID-----PGLHAYVDQRSGLLQDQAE 65

Query: 62  ASDARRARGETLSPLDGIPYTAKDSYLVKGLTAASGSPAFKDLVAQYDAFAVERLRAAGA 121
            +D RR  G  +  LDGIP   KD++ + G     G P  +    Q D+  V RLRA+GA
Sbjct: 66  LADRRRRDG-VIGRLDGIPIALKDNFDIAGWPTRGGLPG-RGRPVQEDSHVVARLRASGA 123

Query: 122 ICLGKTNMPPMANGGM-QRGHYGRAESPYNAEYLTAPFASGSSNGAGTGTAASYSAFGLA 180
           + LGKTNM   A G +    H+G   +PY   Y     A GSS GA    AA  +   + 
Sbjct: 124 MLLGKTNMDEGALGAVTDNPHFGATHNPYRHGYT----AGGSSGGAAAAVAAGLAVAAVG 179

Query: 181 EETWSSGRGPASNNGLCAYTPSRGVISVRGNWPLTPTMDVVVPYTRTMADMLEVLDVIV- 239
            ++  S R PAS  G+ A  P+ G IS RG  P    +D V    R++ D+  +L V+  
Sbjct: 180 SDSLGSIRIPASYCGVYALKPTHGEISTRGMLPAARRLDAVGLLARSVEDLTVLLQVLAG 239

Query: 240 --ADDPITR 246
             ADD  +R
Sbjct: 240 YDADDARSR 248



 Score = 35.8 bits (81), Expect = 4e-06
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 13/89 (14%)

Query: 466 KLDAVLFPTVADVG-PADAHVNPASADIAWSNGVWVANGNLAIRHLGVPTVTVPMGVMAD 524
           ++D ++ PT      P D  V  + AD+        +  +LA    G P V++PMG + +
Sbjct: 378 QVDVLVLPTTPQGAFPLDGPVPDSQADLT-------SFASLA----GCPAVSLPMGTLPN 426

Query: 525 IGMPVGLTFAGRAYDDNNLLKFAGAFEST 553
            GMPVGL   G    D  LL+ A    +T
Sbjct: 427 -GMPVGLQLVGARGSDLRLLELAAVCAAT 454