Pairwise Alignments

Query, 370 a.a., agmatine deiminase (RefSeq) from Shewanella oneidensis MR-1

Subject, 368 a.a., agmatine deiminase from Pseudomonas sp. SVBP6

 Score =  415 bits (1066), Expect = e-120
 Identities = 202/362 (55%), Positives = 245/362 (67%), Gaps = 5/362 (1%)

Query: 11  LTTKPSQDGFYMPAEWAAQQAVWMIWPYRPDNWRAAGAYAQATFAKVVDAIGAATPVYMG 70
           LT+ P  DGF+MPAEWA Q  VWM+WP RPDNWR  G   QA    +  AI    PV + 
Sbjct: 4   LTSTPRADGFHMPAEWAPQTQVWMVWPERPDNWRLGGKPVQAAHVTLAKAIARFEPVTVA 63

Query: 71  VPKAFL--AKAKTVMPSHVTLVEMDSNDCWARDTGPTVVVNAEGECRGVDWGFNAWGGHN 128
           V  A    A+A+  +P+ + +VE+ ++D W RDTGPT V+N  GE RGVDWGFNAWGG  
Sbjct: 64  VSAAQYDNARARLDLPN-IRVVEISNDDAWVRDTGPTFVINDSGEVRGVDWGFNAWGGFE 122

Query: 129 GGLYFPWDKDEQVAQQMLAQHGFARYRAP-LILEGGSIHVDGEGTCMTSAECLLNANRNP 187
           GGLY PW++DEQ+A ++L      RY     +LEGGSIHVDGEGT +T+ ECLLN NRNP
Sbjct: 123 GGLYSPWNRDEQLASKVLEMERCQRYHTEGFVLEGGSIHVDGEGTLITTEECLLNHNRNP 182

Query: 188 ELTKEQIEGLLRDYLNVKQFIWLQDGVYMDETDGHIDNMCCFARPGEVILHWTDDESDPQ 247
            L +EQIE +LRD+L V   IWL DG+Y DETDGH+DN CC+ RPGEV+L WTDD  DP 
Sbjct: 183 HLNREQIEAILRDHLAVDTIIWLPDGLYNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPN 242

Query: 248 YPRSKAALEVLQNTVDAQGRKLKIHLLPQPGPLYCSEEESKGVTEGTG-VPRTAGERLAG 306
           Y R   ALEVL+N+ DA+GR   +H +P PGPL+ SEEE  GV    G   R    RLAG
Sbjct: 243 YARCHGALEVLENSRDAKGRAFTVHKMPIPGPLFASEEECAGVDPVAGSQERNPSVRLAG 302

Query: 307 SYVNFLITNHRIVFPLLDPATDDIAAQKLQEIFPEHEIVGVPAREILLGGGNIHCITQQI 366
           SYVNFLI N  I+ P  D   D  A   L  +FP+HE+V +P RE+LLGGGNIHC+TQQ 
Sbjct: 303 SYVNFLIVNGGIIAPSFDDPADAEARAILARVFPDHEVVMIPGREMLLGGGNIHCLTQQQ 362

Query: 367 PA 368
           PA
Sbjct: 363 PA 364