Pairwise Alignments

Query, 637 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 636 a.a., ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  680 bits (1755), Expect = 0.0
 Identities = 349/636 (54%), Positives = 448/636 (70%), Gaps = 6/636 (0%)

Query: 1   MISINQAQLIRGSKTLLDEASLTIYPGHKVGLVGANGTGKSSLLALIMGHLSLDKGEFSM 60
           MI +    L RG + LL++A LT++ GHK GL+GANG GKS+L AL++G L+ D G+  +
Sbjct: 1   MIRLQSLTLQRGPQRLLEDAELTLHAGHKAGLIGANGAGKSTLFALLLGELTPDSGDCLL 60

Query: 61  PSGWQIASVAQETPALDMSALEYVLDGDKEYRQLEADLHIAQEHNDGHAIATLHGKIDAI 120
           P+ W+IA + QE   LD  A++YVLDGD   RQ++ DL  A++  DG A A LH ++D+ 
Sbjct: 61  PADWRIAHMRQEIDTLDRIAIDYVLDGDLRLRQVQHDLAEAEKAQDGAAQARLHSELDSA 120

Query: 121 GGYAIRARAGALLAGLGFSEAEQNNPVKSFSGGWRMRLNLAQALLCRSDLLLLDEPTNHL 180
            GY   ARA  +LAGLGF+  + + PV  FSGGWRMRLNLAQAL+C SDLLLLDEPTNHL
Sbjct: 121 DGYTADARARKMLAGLGFTNEQMDRPVADFSGGWRMRLNLAQALMCPSDLLLLDEPTNHL 180

Query: 181 DLDTMYWLEGWIKSYQGTLILISHDRDFIDEIVDEIVHVENQKLNFYKGNYSAFERIRAE 240
           DLD + WLE ++K+YQGTL+LISHDRDF+D +VD I HVE +K+  Y+G Y+AFER RAE
Sbjct: 181 DLDAILWLEDFLKNYQGTLLLISHDRDFLDAVVDNIAHVEQKKITLYRGGYTAFERARAE 240

Query: 241 RMAQQQVAFERQQKERAHMQSFVDRFRYKASKAKQAQSRLKALERMTELLPSQADSPFYM 300
           R+AQQQ A+E+QQ +RAHM+S++ RF+ +A+KA+QAQSR+KALERM EL  +  DSPF  
Sbjct: 241 RLAQQQQAYEKQQAQRAHMESYIARFKAQATKARQAQSRIKALERMEELSAAHVDSPFDF 300

Query: 301 EFRPPEALPNPLIKMEQVAVGYGDKQILSKVHLNLVPGARIGLLGRNGAGKSTLIKLLSG 360
            FR    + +PL+ +    +GYGDK IL KV L L PGARIGLLG NGAGKSTLIK LSG
Sbjct: 301 VFRESVKISSPLLDLSDARLGYGDKTILEKVKLQLTPGARIGLLGPNGAGKSTLIKNLSG 360

Query: 361 QLSPMTGLYEPNPGLNIGYFAQHQIEFLRLDDTPLQHLVRLAPNAREQELRNFLGGFGFN 420
           +LSP+ G         +GYFAQHQ++ L    +PL HL RLAP  REQ LR+FLGGF F 
Sbjct: 361 ELSPLAGRLTRGENTVVGYFAQHQLDSLDSKASPLLHLQRLAPTEREQTLRDFLGGFDFR 420

Query: 421 GDMALSPVRPFSGGEKARLVLALLVWQRPNLLLLDEPTNHLDLEMRHALTMALQTFEGAM 480
           G     PV  FSGGEKARL LAL+ W RPNLLLLDEPTNHLDLEMR ALTMALQ F GA+
Sbjct: 421 GARIDEPVLNFSGGEKARLALALIAWDRPNLLLLDEPTNHLDLEMRLALTMALQEFSGAV 480

Query: 481 VIVSHDRHLLRLTCSDYYLVDQGEVQAFDGDLDDYHQWLLD--AAKAASANQAANSDDTK 538
           ++VSHDRHLL+ T  ++ LV  G+V+ FDGDLDDY +WL D     A  +N   N D T 
Sbjct: 481 LVVSHDRHLLKSTTDNFLLVADGKVEEFDGDLDDYARWLTDYRLRNAPVSNTPVNPDKT- 539

Query: 539 PAVDKKQQKRLEAELRQKVSPLKRKQAKLEIDQQKLSERLAELEHLLADGELYDQDNKAK 598
              DKK Q++  A LRQ+++P KR+  KLE +  K+ ERLA++E  L D  +Y+   K +
Sbjct: 540 ---DKKAQRQAAAALRQQLAPHKREADKLEAELGKVHERLAKIETSLGDSAVYEAARKDE 596

Query: 599 LTSVLSERTSLTQTLEESEMQWLELQEEIDTMELEL 634
           L  +L+E+  L     + E  W+E  E ++T++ EL
Sbjct: 597 LRDLLAEQAKLKVREGQLEETWMEALELLETLQAEL 632