Pairwise Alignments

Query, 637 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 666 a.a., Bis-ABC ATPase YheS from Variovorax sp. SCN45

 Score =  554 bits (1427), Expect = e-162
 Identities = 312/669 (46%), Positives = 418/669 (62%), Gaps = 44/669 (6%)

Query: 1   MISINQAQLIRGSKTLLDEASLTIYPGHKVGLVGANGTGKSSLLALIMGHLSLDKGEFSM 60
           MI++    L R +K LLD A++T+ PG KVGLVG NG GKS+L AL+ G L  D G+F +
Sbjct: 1   MITLKNVILRRSAKVLLDGATVTLNPGEKVGLVGRNGAGKSTLFALLNGTLHEDGGDFYV 60

Query: 61  PSGWQIASVAQETPALDMSALEYVLDGDK---EYRQLEADLHIAQEHND-----GHAIAT 112
           P  W++A VAQ  P  D SA E+V+ GD    E R+  A +  A   N      G  +A 
Sbjct: 61  PKQWRMAQVAQNMPETDESATEFVVGGDTRLTELREALAAIEAAYAENPDDADIGMQLAH 120

Query: 113 LHGKIDAIGGYAIRARAGALLAGLGFSEAEQNNPVKSFSGGWRMRLNLAQALLCRSDLLL 172
            +  +   G +    RA AL+ GLGF   E + PV SFSGGWRMRL LA+AL+C SDLLL
Sbjct: 121 AYTDLADAGEHDAVPRAQALILGLGFKAHEVDEPVNSFSGGWRMRLQLARALMCPSDLLL 180

Query: 173 LDEPTNHLDLDTMYWLEGWIKSYQGTLILISHDRDFIDEIVDEIVHVENQKLNFYKGNYS 232
           LDEPTNHLDLD + WLE W++ Y GT+I+ISHDR+F+D + D  +H+ N +L  Y GNYS
Sbjct: 181 LDEPTNHLDLDALVWLEAWLQKYAGTMIVISHDREFLDAVTDVTLHIANAQLTRYGGNYS 240

Query: 233 AFERIRAERMAQQQVAFERQQKERAHMQSFVDRFRYKASKAKQAQSRLKALERMTELLPS 292
            FE +RA +M QQQ AF +QQ + AH+Q F+DRF+ KASKAKQAQSR+KALERM  + P 
Sbjct: 241 KFEDMRALQMEQQQQAFTKQQDKIAHLQKFIDRFKAKASKAKQAQSRVKALERMERVAPL 300

Query: 293 QADSPFYMEFRPPEALPNPLIKMEQVAVGYGD---------KQILSKVHLNLVPGARIGL 343
            A++ F  EF+ P ++PNP++ +   + GY +         K IL  V+ +++ G RIG+
Sbjct: 301 LAEADFTFEFKEPGSIPNPMLSISNASFGYKNPEGGENEEPKTILRGVNRSVLAGQRIGI 360

Query: 344 LGRNGAGKSTLIKLLSGQLSPMTGLYEPNPGLNIGYFAQHQIEFLRLDDTPLQHLVRLA- 402
           LG NG GKSTL+K ++ ++  + G      GLNIGYFAQ +++ LR  DTPL+H+VR+A 
Sbjct: 361 LGANGQGKSTLVKTIAREMGALAGQVTEGKGLNIGYFAQQELDVLRPQDTPLEHMVRMAR 420

Query: 403 ---PNAR----EQELRNFLGGFGFNGDMALSPVRPFSGGEKARLVLALLVWQRPNLLLLD 455
               NA+    EQ LR FLG F F+GDM   PV   SGGEKARLVLA++VWQRPNLLLLD
Sbjct: 421 ELGSNAKEATGEQALRGFLGSFNFSGDMVKQPVGTMSGGEKARLVLAMMVWQRPNLLLLD 480

Query: 456 EPTNHLDLEMRHALTMALQTFEGAMVIVSHDRHLLRLTCSDYYLVDQGEVQAFDGDLDDY 515
           EPTNHLDL  R AL +AL  FEG +++VSHDR LLR  C +++LV +G V  FDGDLDDY
Sbjct: 481 EPTNHLDLATREALAVALNEFEGTLMLVSHDRALLRSVCDEFWLVGRGVVGDFDGDLDDY 540

Query: 516 HQWLLDAAK------------AASANQAANSDDTKPAVDKKQQKRLEAELRQKVSPLKRK 563
            ++LLD AK            A +A  AA +    PA    QQ++ +A+ RQ+ S  + K
Sbjct: 541 QRYLLDEAKRLREEAKVATREAVTAAAAAAAPVAAPAA--PQQRKQDAQERQQRSD-QAK 597

Query: 564 QAKLEIDQQKLSERLAE--LEHLLADGELYDQDNKAKLTSVLSERTSLTQTLEESEMQWL 621
             K EI Q  + ERLA    E    +  +      A++        +L   +   E +WL
Sbjct: 598 PIKREIAQ--IDERLAAAGTERTALEARMSQPLPSAEIAEAGKRLKALNDEIGRLEERWL 655

Query: 622 ELQEEIDTM 630
            L ++++ +
Sbjct: 656 ALSDQLEAL 664