Pairwise Alignments

Query, 637 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 636 a.a., putative of ABC superfamily informational factor: ATP-binding components from Pseudomonas putida KT2440

 Score =  687 bits (1773), Expect = 0.0
 Identities = 349/636 (54%), Positives = 453/636 (71%), Gaps = 6/636 (0%)

Query: 1   MISINQAQLIRGSKTLLDEASLTIYPGHKVGLVGANGTGKSSLLALIMGHLSLDKGEFSM 60
           MI ++   L RG + LL+ A +T++ GHK GL+GANG GKSSL AL+ G LS D G+  +
Sbjct: 1   MIRLSNLTLQRGPQRLLEGAEMTLHAGHKAGLIGANGAGKSSLFALLRGELSPDAGDCQL 60

Query: 61  PSGWQIASVAQETPALDMSALEYVLDGDKEYRQLEADLHIAQEHNDGHAIATLHGKIDAI 120
           P  W+IA + QE   LD  A++YVLDGD   R+++A+L  A++ +DG A+A LH ++++ 
Sbjct: 61  PGDWRIAHMRQEVDTLDRLAVDYVLDGDVRLRKVQAELAAAEQAHDGTALARLHSELESA 120

Query: 121 GGYAIRARAGALLAGLGFSEAEQNNPVKSFSGGWRMRLNLAQALLCRSDLLLLDEPTNHL 180
            GY   ARA  LLAGLGF+  + +  V  FSGGWRMRLNLAQAL+C SDLLLLDEPTNHL
Sbjct: 121 DGYTADARARKLLAGLGFTNEQMDRRVGDFSGGWRMRLNLAQALMCPSDLLLLDEPTNHL 180

Query: 181 DLDTMYWLEGWIKSYQGTLILISHDRDFIDEIVDEIVHVENQKLNFYKGNYSAFERIRAE 240
           DLD + WLE W+K Y GTL+LISHDRDF+D +VD ++HVE +KLN YKG Y+AFER RAE
Sbjct: 181 DLDAILWLEDWLKGYPGTLLLISHDRDFLDAVVDHVLHVEQRKLNLYKGGYTAFERTRAE 240

Query: 241 RMAQQQVAFERQQKERAHMQSFVDRFRYKASKAKQAQSRLKALERMTELLPSQADSPFYM 300
           R+AQQQ A+E+QQ +RAHM+ ++ RF+ +A+KA+QAQSR+KALERM EL  +  DSPF  
Sbjct: 241 RLAQQQQAYEKQQAQRAHMEKYIARFKAQATKARQAQSRIKALERMEELSAAHVDSPFDF 300

Query: 301 EFRPPEALPNPLIKMEQVAVGYGDKQILSKVHLNLVPGARIGLLGRNGAGKSTLIKLLSG 360
            FR  + + +PL+ + +  +GYGDK IL KV L L PGARIGLLG NGAGKSTLIK L+G
Sbjct: 301 VFRESQKISSPLLSLSEGRLGYGDKAILDKVKLQLTPGARIGLLGPNGAGKSTLIKNLAG 360

Query: 361 QLSPMTGLYEPNPGLNIGYFAQHQIEFLRLDDTPLQHLVRLAPNAREQELRNFLGGFGFN 420
           +L P++G       L +GYFAQHQ++ L    +PL HL R+AP  REQ LR+FLGGF F+
Sbjct: 361 ELEPLSGRLVRGENLAVGYFAQHQLDSLDDKASPLLHLQRIAPTEREQTLRDFLGGFDFH 420

Query: 421 GDMALSPVRPFSGGEKARLVLALLVWQRPNLLLLDEPTNHLDLEMRHALTMALQTFEGAM 480
           G     PV  FSGGEKARL LAL+ W+RPNLLLLDEPTNHLDLEMR ALTMALQ F GA+
Sbjct: 421 GARCDEPVVNFSGGEKARLALALIAWERPNLLLLDEPTNHLDLEMRLALTMALQEFAGAV 480

Query: 481 VIVSHDRHLLRLTCSDYYLVDQGEVQAFDGDLDDYHQWLLD--AAKAASANQAANSDDTK 538
           V+VSHDRHLL+ T  D+ LV  G+V  FDGDL+DY +WL++     A ++   AN D T 
Sbjct: 481 VVVSHDRHLLKSTTDDFLLVADGKVDTFDGDLEDYSRWLVEYRQRSAPASTAPANPDKT- 539

Query: 539 PAVDKKQQKRLEAELRQKVSPLKRKQAKLEIDQQKLSERLAELEHLLADGELYDQDNKAK 598
              DKK Q++  A LRQ+++P K+   KLE +  ++  +LAE+E  L DG LYD   K +
Sbjct: 540 ---DKKAQRQAAAALRQQLAPHKKAADKLETELNQVHAQLAEIETALGDGGLYDAARKDE 596

Query: 599 LTSVLSERTSLTQTLEESEMQWLELQEEIDTMELEL 634
           L  +L+ +T L Q   E E  W+E  E +++M+ EL
Sbjct: 597 LRDLLARQTKLKQREGELEEAWMEALETLESMQAEL 632