Pairwise Alignments

Query, 637 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 651 a.a., ATPase components of ABC transporters with duplicated ATPase domains from Kangiella aquimarina DSM 16071

 Score =  704 bits (1816), Expect = 0.0
 Identities = 367/648 (56%), Positives = 467/648 (72%), Gaps = 20/648 (3%)

Query: 1   MISINQAQLIRGSKTLLDEASLTIYPGHKVGLVGANGTGKSSLLALIMGHLSLDKGEFSM 60
           M+      L RG K L ++AS  I P  KVG+ GANGTGKSSL ALI G L  D G FSM
Sbjct: 1   MLFFENMALRRGKKVLFEDASFIINPRDKVGVTGANGTGKSSLFALIRGELEEDAGNFSM 60

Query: 61  PSGWQIASVAQETPALDMSALEYVLDGDKEYRQLEADLHIAQE------HN--DGHAIAT 112
             G  I+SV QETP+++  ALEYVL GD+E   +EA+L   +E      HN  DG  +A 
Sbjct: 61  AGGITISSVRQETPSVETPALEYVLQGDEELCAVEAELARLEEKAAQGDHNEADGQRVAK 120

Query: 113 LHGKIDAIGGYAIRARAGALLAGLGFSEAEQNNPVKSFSGGWRMRLNLAQALLCRSDLLL 172
           LH K+D I GY+ RARAG+L+ GLGF+  ++  PV SFSGGWRMRLNLAQAL+CRS+LLL
Sbjct: 121 LHQKLDEIDGYSARARAGSLMHGLGFNAEQEQLPVSSFSGGWRMRLNLAQALMCRSNLLL 180

Query: 173 LDEPTNHLDLDTMYWLEGWIKSYQGTLILISHDRDFIDEIVDEIVHVENQKLNFYKGNYS 232
           LDEPTNHLD++ + WLE W+K+YQG ++LISHDRDF+D  V+ I H+E  K+  Y GNYS
Sbjct: 181 LDEPTNHLDMEAVIWLENWLKAYQGAVLLISHDRDFLDRTVNRIAHIEQGKVTLYSGNYS 240

Query: 233 AFERIRAERMAQQQVAFERQQKERAHMQSFVDRFRYKASKAKQAQSRLKALERMTELLPS 292
            FE  RAE++AQQQ  FERQQKE +HMQSFVDRF+ KASKAKQAQSRLKALERM ++ P+
Sbjct: 241 DFEIQRAEQLAQQQAQFERQQKEISHMQSFVDRFKAKASKAKQAQSRLKALERMEKIAPA 300

Query: 293 QADSPFYMEFRPPEALPNPLIKMEQVAVGY----GDKQILSKVHLNLVPGARIGLLGRNG 348
             DSPF+ EF     LP+PL++++    GY    G K++LS V  +L+PG RIGLLG+NG
Sbjct: 301 HVDSPFHFEFPELGHLPSPLLQLKSADAGYQLEEGVKKVLSGVGFSLMPGDRIGLLGKNG 360

Query: 349 AGKSTLIKLLSGQLSPMTGLYEPNPGLNIGYFAQHQIEFLRLDDTPLQHLVRLAPNAREQ 408
           AGKSTLIK+L+G+L+ + G       L IGYFAQHQ+E L    +PLQHL R  P A EQ
Sbjct: 361 AGKSTLIKVLAGELALLAGEKVLAKTLKIGYFAQHQLEQLHPQMSPLQHLQRDYPKATEQ 420

Query: 409 ELRNFLGGFGFNGDMALSPVRPFSGGEKARLVLALLVWQRPNLLLLDEPTNHLDLEMRHA 468
           ELRNFLGGF FNGD AL PV PFSGGEKARLVLA+LV+ +PNLLLLDEPTNHLDLEMR A
Sbjct: 421 ELRNFLGGFDFNGDKALEPVAPFSGGEKARLVLAMLVYSKPNLLLLDEPTNHLDLEMRLA 480

Query: 469 LTMALQTFEGAMVIVSHDRHLLRLTCSDYYLVDQGEVQAFDGDLDDYHQWLLD------- 521
           +TMA Q+FEGAMV+VSHDRH+LR  C D YLV  G+V+ F GDLDDY +W L+       
Sbjct: 481 MTMAFQSFEGAMVLVSHDRHMLRTVCDDLYLVADGKVEPFKGDLDDYARWSLEDTLQQKK 540

Query: 522 AAKAASANQ-AANSDDTKPAVDKKQQKRLEAELRQKVSPLKRKQAKLEIDQQKLSERLAE 580
           A +  S+ Q   +S  T   + +K+Q+R+EAE R+++ PLK K  KLE    +L +R A+
Sbjct: 541 AGQTQSSQQKVTDSGSTDNELSRKEQRRIEAEKRKQLQPLKNKLKKLEQQLDELQQRKAK 600

Query: 581 LEHLLADGELYDQDNKAKLTSVLSERTSLTQTLEESEMQWLELQEEID 628
           L+ ++AD  LY++ NK+KL  + +E + +T  LE++E +WLELQ++++
Sbjct: 601 LDDVMADQSLYEESNKSKLVQLTAEYSEVTGQLEQTEEEWLELQDQLE 648