Pairwise Alignments

Query, 299 a.a., glutamyl-tRNA synthetase domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 471 a.a., glutamate--tRNA ligase from Dickeya dadantii 3937

 Score =  139 bits (350), Expect = 1e-37
 Identities = 87/257 (33%), Positives = 132/257 (51%), Gaps = 17/257 (6%)

Query: 18  RFAPSPSGALHFGSLVAALGSYLRARSLGGKWLIRIEDIDPPREVKGAADDILRTLEAYG 77
           RFAPSP+G LH G    AL S+L AR  GG++++RIED D  R  K A D I+  +    
Sbjct: 6   RFAPSPTGYLHVGGARTALYSWLFARHHGGEFVLRIEDTDLERSTKEAIDAIMDGMNWLN 65

Query: 78  FEWDDTVLYQSARTDAYQAKLDQLLAQDDAYFCQCSRKQIQAM---------GGIYDGRC 128
             WD+   YQ+ R D Y   +DQ+L    AY C CS+ +++A+            YDG C
Sbjct: 66  LGWDEGPYYQTKRFDRYNVVIDQMLENGTAYKCYCSKARLEALREQQMADGEKPRYDGCC 125

Query: 129 ---HQLATPHQSGAIRLVNRAQVAEFTDNLMGKVVVDHDFATEDFIIKRSDGLYAYQLAV 185
              H+     +   +R  N    +   D+ +   +   +   +D II+R+DG   Y   V
Sbjct: 126 RDSHEHHADDEPHVVRFRNPQDGSVIFDDRIRGPIEFSNLELDDLIIRRTDGSPTYNFCV 185

Query: 186 VLDDAHQGISEVVRGCDLIEASCRQLSLYQSLGLTAPQWLHLPLACLTPGFKLSKQNHAQ 245
           V+DD   GI+ V+RG D I  + RQ+++ ++LG   P++ H+ +     G KLSK++ A 
Sbjct: 186 VIDDWDMGITHVIRGEDHINNTPRQINILKALGAPVPEYAHVSMILGDDGKKLSKRHGAV 245

Query: 246 AI-----DKQHPQASLN 257
            +     D   P+A LN
Sbjct: 246 GVMQYRDDGYLPEALLN 262