Pairwise Alignments

Query, 438 a.a., polyA polymerase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 368 a.a., tRNA nucleotidyltransferase - 2',3'-cyclic phosphodiesterase - 2' nucleotidase and phosphatase from Pseudomonas putida KT2440

 Score = 58.2 bits (139), Expect = 4e-13
 Identities = 63/223 (28%), Positives = 96/223 (43%), Gaps = 22/223 (9%)

Query: 35  YLVGGGVRDLLLGLEPKDFD-VVTNATPEEIKKLFRNCRVVGRRFRL-AHIVFGRDVIEV 92
           Y VGG VRD LLG    D D +V  AT EE+  L    R VG  F +  H   G +    
Sbjct: 4   YKVGGAVRDRLLGRPVSDIDWLVVGATVEEM--LANGYRPVGADFPVFLHPKTGEEYALA 61

Query: 93  ATFRGHHGESNEKISKANAEGRLLRDNVYGEIDEDAERRDFTVNALYYDISDYSIRSYGG 152
            T         E+ S     G     +    ++ED  RRD T+NA+  D +      Y G
Sbjct: 62  RT---------ERKSGRGYGGFTFHASPDVTLEEDLIRRDLTINAMAEDEAGTVYDPYQG 112

Query: 153 GMEDLKAGTLRLIGDPETRYREDPVRMLRAVRFATK---LSMTIDEVTAKPIKQLAPL-- 207
              DL    LR +      + EDP+R+LR  RFA +   L   + + T   ++Q++    
Sbjct: 113 -KNDLDQRLLRHVSPA---FAEDPLRVLRVARFAARYAPLGFRVADETLALMRQISASGE 168

Query: 208 LKDIPAARMYEEVLKLFFAGKAVANFDMMQEYKLFAPLFPQVD 250
           L+ + A R ++E+ +     +    F ++        L P++D
Sbjct: 169 LQALTAERSWKEIERALMEVQPQVFFKVLSACGALQELLPELD 211