Pairwise Alignments

Query, 438 a.a., polyA polymerase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 439 a.a., Poly(A) polymerase I precursor from Alteromonas macleodii MIT1002

 Score =  486 bits (1250), Expect = e-142
 Identities = 238/433 (54%), Positives = 317/433 (73%), Gaps = 10/433 (2%)

Query: 6   RDAHSISRKQISENALKVLYRLNKAGFQAYLVGGGVRDLLLGLEPKDFDVVTNATPEEIK 65
           R  H ISR+ +S NALKV+YRLN AGF++YLVGG VRD+L+G EPKDFDVVTNATPE+IK
Sbjct: 3   RGEHGISREDVSANALKVMYRLNGAGFESYLVGGCVRDILMGHEPKDFDVVTNATPEQIK 62

Query: 66  KLFRNCRVVGRRFRLAHIVFGRDVIEVATFRGHHGESNEK--------ISKANAEGRLLR 117
            LFRNCR++GRRFRLAHIVFGR++IEVATFRGHH ES+E         ++K +A G+L+R
Sbjct: 63  GLFRNCRLIGRRFRLAHIVFGREIIEVATFRGHHQESDEDENLPKGKAVAKRDAHGQLVR 122

Query: 118 DNVYGEIDEDAERRDFTVNALYYDISDYSIRSYGGGMEDLKAGTLRLIGDPETRYREDPV 177
           DNV+G I+EDAERRDFT NA+YY ++D++++ +  G+  ++   + LIGDPETRYREDPV
Sbjct: 123 DNVFGTIEEDAERRDFTFNAMYYSVADFTVKDFANGLAAIEKREVELIGDPETRYREDPV 182

Query: 178 RMLRAVRFATKLSMTIDEVTAKPIKQLAPLLKDIPAARMYEEVLKLFFAGKAVANFDMMQ 237
           RMLRAVRFA KL M I+  TA PIK LA LL++IP AR++EE LKLF +GK    F M+ 
Sbjct: 183 RMLRAVRFAVKLGMRIEAKTAAPIKSLANLLQNIPPARLFEETLKLFLSGKGEETFLMLH 242

Query: 238 EYKLFAPLFPQVDALLKEAPKGPAMKMVQAIMKSTDDRVNEDKPVTPSFFYAAILWYPLR 297
           EY L  PLFPQ+   LK+      M+ V+ ++ +TD+R+N D+ VTP+F YAA+LWYP+ 
Sbjct: 243 EYGLIEPLFPQLTPFLKD-ENSREMQFVRRVLANTDERINSDQRVTPAFLYAALLWYPVE 301

Query: 298 QRAEDIAVESGLTLYDAFFAAMGDVMEQQCQTISIPRRFSTPAKDIWQLQLRFERSQGTR 357
           + ++ +  ESGL  +DAF  A G+V+ +Q Q I IP+RFST  +DIW LQ R  +  G R
Sbjct: 302 EESQRLQSESGLNAHDAFNIASGEVIARQTQRIMIPKRFSTVVRDIWILQQRLPKRFGRR 361

Query: 358 AFKLLEHPKFRAAYDLLLLRGEVEGGNLAKSAAWWQQFVEADETERLTIARSGNKASGNR 417
           AF+LL HPKFRA YD LL RG++EGG+L + A WW  F  AD  ++  +  +  K+ G  
Sbjct: 362 AFQLLTHPKFRAGYDFLLARGQIEGGDLLELAQWWTHFQHADNGKQKGMLNALRKSEGGA 421

Query: 418 NRNTPQRRRRRPS 430
            +  P++R+R+P+
Sbjct: 422 -KGAPRKRKRKPA 433