Pairwise Alignments

Query, 264 a.a., 3-methyl-2-oxobutanoate hydroxymethyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 279 a.a., 3-methyl-2-oxobutanoate hydroxymethyltransferase from Agrobacterium fabrum C58

 Score =  191 bits (485), Expect = 1e-53
 Identities = 113/263 (42%), Positives = 152/263 (57%), Gaps = 4/263 (1%)

Query: 3   KVTSSTLLKYKQEGRKFTALTAYDASFASAFDGEGIDVLLVGDSLGMVLQGHDDTLPVTT 62
           ++T++++ + K E R    LTAY    A   D    D+LLVGDSLGMVL G + T+ VT 
Sbjct: 9   RLTTASIRQMKGEAR-IVCLTAYTTPIARLLDPH-CDLLLVGDSLGMVLYGMETTVGVTL 66

Query: 63  ADIAYHTRCVRRGIERSLLIADMPFMSYA-TPEQAMENATTLMQ-AGANMVKLEGGHWLL 120
             +  H R V RG+E + +I D+PF +Y  + EQA  NA  LMQ  G + VKLEGG  + 
Sbjct: 67  DMMIAHGRAVMRGVEHACVIVDLPFGTYQESKEQAFRNAVRLMQETGCDGVKLEGGEEMA 126

Query: 121 ETVTKLTERGIPVCAHLGLTPQSVNVFGGFKVQGRDAENAQRIIDEAKALEAAGAQLLVV 180
           ET+  L  RGIPV  H+GL PQ V+  GGF+  G      Q+I  +  A++ AGA  +VV
Sbjct: 127 ETIAFLVARGIPVFGHVGLMPQLVHTAGGFRSLGHSDAETQKIWRDGIAVDQAGAFAIVV 186

Query: 181 ECIPASLATAITQALTIPVIGIGAGATTDGQILVMHDVLGISSGYIPRFSKNYLKQTGEI 240
           E     LA  +T+ L  P +GIGA    DGQ+LV  D+LG+ S + P+F K Y       
Sbjct: 187 EGTVEPLARELTEKLAAPTVGIGASPACDGQVLVSDDMLGLFSDFKPKFVKRYADLGTAA 246

Query: 241 RSAVRAYIEEVANGSFPSAEHTF 263
             A  AY +EV +G+FP  EHTF
Sbjct: 247 TQAAAAYADEVRSGAFPGPEHTF 269