Pairwise Alignments
Query, 502 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1
Subject, 481 a.a., minor curlin subunit CsgB, nucleation component of curlin monomers from Pseudomonas putida KT2440
Score = 128 bits (321), Expect = 5e-34
Identities = 129/483 (26%), Positives = 206/483 (42%), Gaps = 59/483 (12%)
Query: 6 KMSLIALAITAGLSGHALAASTINEISVKQTGEGQDTL--VAQTGVINAAAV-TQTGNAQ 62
K++ ++ AI L+G A+AA + + QT +G++ + V+QT A+A QTG
Sbjct: 3 KLAPLSAAIVLALAGQAMAADSTSS----QTQDGKENIAEVSQTQASFASATQNQTGMGH 58
Query: 63 VATVVQDGVWHEAQVNSTGDANEVTVSQ------QTDWHVA-------AVDVTGNNNEAE 109
VQ + Q ++TG N Q Q H A G+NNE+
Sbjct: 59 NHLAVQAESTSDIQQSATGQYNAGYAEQLFENGSQITQHAGGSYNDAFASQSLGSNNESL 118
Query: 110 VTQDGFFNQSS--NDVVGNDNLVSVNQLGELNESYVEIT--GNENSAFVEQEGDENLAVF 165
TQ G N+S+ D S Q G+ NE+++E T G+ N + V Q G +N A
Sbjct: 119 QTQQGVGNKSTVWQDSQEGSKATS-GQSGQRNEAFIEQTFGGSNNRSTVNQTGQDNYATA 177
Query: 166 RVEGDNNDGDIKQY--GNNNQAGLIALDLSANVGNNNDVSVEQIGNNNFGAAKGIAGNDN 223
++ DGDI+ Y G++N A G +++ Q G N +
Sbjct: 178 E-HLNHVDGDIQVYQEGHDNWAYG-----DQREGTGGTIAIGQYGGGNSVEVWQDTQIGS 231
Query: 224 SVDIYQKGDNHTGFVYALAGSENDISMEQEGSNNTAYLSMTTGDDNTVDITQDGDSNTV- 282
+ Q G ++ G++ G N +S+ Q+G+ N ++ +++T ITQ G++N
Sbjct: 232 QASVVQTGQSNEGYIDQSFGVSNKVSLSQQGNANASWSDQFETNNSTTTITQTGNNNLHF 291
Query: 283 ----GDSLIADI--QGDDNDITIK---------QKGDSNGAEFQVWGDSNDVDLKQRGDA 327
G++L I QG+ N IT Q G + A G+ N V+L Q+G
Sbjct: 292 TYQNGENLNLTINTQGNGNSITASNWKGAKMGGQFGTNQNATINQAGNGNGVNLTQKGAD 351
Query: 328 NFATFGAYGTDNDFDLSSKGDNNELVAFATGEDNSIEISQEGDANFAYVDATGNDNEVNV 387
AT G N +NEL G DN + Q G N+AY + G N + +
Sbjct: 352 QLATLTQTGKGNQMSTKQDDVSNELYFEQNGTDNILIADQRGTDNYAYGSSQGTGNTITL 411
Query: 388 EQDGDQNETI----------ITVEGNNNADVTALQHRGDLNLIDLIIEGDENAAEITQAG 437
+Q G N++ T++ ++ +V + G N + G +A ITQ G
Sbjct: 412 DQSGYSNQSYTNQLYGSGNEATIKQTDSINVAYVTQGGQSNKAFVDQSGVAQSATITQLG 471
Query: 438 SGN 440
S N
Sbjct: 472 SAN 474
Score = 67.8 bits (164), Expect = 8e-16
Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 1/153 (0%)
Query: 27 TINEISVKQTGEGQDTLVAQTGVINAAAVTQTGNAQVATVVQDGVWHEAQVNSTGDANEV 86
T ++ Q G G + Q G A +TQTG + QD V +E G N +
Sbjct: 328 TNQNATINQAGNGNGVNLTQKGADQLATLTQTGKGNQMSTKQDDVSNELYFEQNGTDNIL 387
Query: 87 TVSQQTDWHVAAVDVTGNNNEAEVTQDGFFNQS-SNDVVGNDNLVSVNQLGELNESYVEI 145
Q+ + A G N + Q G+ NQS +N + G+ N ++ Q +N +YV
Sbjct: 388 IADQRGTDNYAYGSSQGTGNTITLDQSGYSNQSYTNQLYGSGNEATIKQTDSINVAYVTQ 447
Query: 146 TGNENSAFVEQEGDENLAVFRVEGDNNDGDIKQ 178
G N AFV+Q G A G N + Q
Sbjct: 448 GGQSNKAFVDQSGVAQSATITQLGSANLATVTQ 480
Score = 65.9 bits (159), Expect = 3e-15
Identities = 80/310 (25%), Positives = 122/310 (39%), Gaps = 37/310 (11%)
Query: 203 SVEQIGNNNFGAAKGIAGNDNSVDIYQKGDNHTGFVYALAGSENDISMEQEGSNNTAYLS 262
S Q G N + S Q G H A S +DI G N Y
Sbjct: 27 SQTQDGKENIAEVSQTQASFASATQNQTGMGHNHLAVQ-AESTSDIQQSATGQYNAGYAE 85
Query: 263 MTTGDDNTVDITQDGDSNTVGDSLIADIQGDDNDITIKQKGDSNGAEFQVWGDSND---V 319
+N ITQ + D+ + G +N+ Q+G N + VW DS +
Sbjct: 86 QLF--ENGSQITQHA-GGSYNDAFASQSLGSNNESLQTQQGVGNKST--VWQDSQEGSKA 140
Query: 320 DLKQRGDANFA----TFGAYGTDNDFDLSSKGDNNELVAFATGE-----DNSIEISQEGD 370
Q G N A TFG G++N ++ G +N +AT E D I++ QEG
Sbjct: 141 TSGQSGQRNEAFIEQTFG--GSNNRSTVNQTGQDN----YATAEHLNHVDGDIQVYQEGH 194
Query: 371 ANFAYVDAT-GNDNEVNVEQDGDQNETIITVEGNNNADVTALQH-RGDLNLIDLIIEGDE 428
N+AY D G + + Q G N + + + + +Q + + ID G
Sbjct: 195 DNWAYGDQREGTGGTIAIGQYGGGNSVEVWQDTQIGSQASVVQTGQSNEGYIDQSF-GVS 253
Query: 429 NAAEITQAGSGNWVGGDSSSSFAASSFGVSGDNNSLMITQTGNDNLVLGSQAGNNNSISV 488
N ++Q G+ N D + +N++ ITQTGN+NL Q G N ++++
Sbjct: 254 NKVSLSQQGNANASWSDQFET----------NNSTTTITQTGNNNLHFTYQNGENLNLTI 303
Query: 489 TQSGDMNVAT 498
G+ N T
Sbjct: 304 NTQGNGNSIT 313
Score = 44.7 bits (104), Expect = 7e-09
Identities = 24/55 (43%), Positives = 29/55 (52%)
Query: 37 GEGQDTLVAQTGVINAAAVTQTGNAQVATVVQDGVWHEAQVNSTGDANEVTVSQQ 91
G G + + QT IN A VTQ G + A V Q GV A + G AN TV+QQ
Sbjct: 427 GSGNEATIKQTDSINVAYVTQGGQSNKAFVDQSGVAQSATITQLGSANLATVTQQ 481