Pairwise Alignments

Query, 255 a.a., transcriptional regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 216 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score = 62.4 bits (150), Expect = 7e-15
 Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 20/189 (10%)

Query: 58  IGLKTRIVKHASELELNVDKGHRS----FCLIAQKGAALDNKGIPLLASRLVPHIPVALY 113
           +G   R+V+ AS  EL      ++      L      A    G+ LL  +  P IPV + 
Sbjct: 27  LGSDVRLVEVASIAELETRLSEKADWDLVLLDLNMPGAYGFSGLVLLRGQY-PQIPVVMV 85

Query: 114 QVERNSLDQESAMLLGIRGLLFTDQRMDLMLTGLRKMVADELWYDRTLLSKMFRRVVQKL 173
             +  +     +   G  G +     ++++   +RK++  E+W+      K+        
Sbjct: 86  SAQEEAAVVVKSREFGASGFIPKSSTLEVIQDAVRKVLDGEVWWPPQAFEKV-------- 137

Query: 174 DGQNDMPADTVAM---LQALTSRERTIIQFVSSGARNKEIAHRLCISEHTVKAHISSIFR 230
               D+ A+  A    L +LT ++  ++  V  G  NK+IA+ L +SE T+KAH+++IFR
Sbjct: 138 ----DVSAEAKAASEGLASLTPQQFRVLTMVCEGLLNKQIAYELSVSEATIKAHVTAIFR 193

Query: 231 KTQSRNRVE 239
           K   R R +
Sbjct: 194 KLGVRTRTQ 202