Pairwise Alignments

Query, 201 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 228 a.a., Predicted membrane protein from Kangiella aquimarina DSM 16071

 Score =  128 bits (322), Expect = 7e-35
 Identities = 76/189 (40%), Positives = 104/189 (55%), Gaps = 10/189 (5%)

Query: 9   GIYLSVLAWSAIKPADPFTWWLEALPALVAVPLLFFTRKRFELTPLVYFLVLVHCCVLFV 68
           GI+L V    AI P D  TW LE +   + V  L  + KRF L+ + YF + +  C   +
Sbjct: 13  GIFLVVFILCAINPVDRSTWLLENVLMFLLVAGLIASYKRFRLSRISYFCIFLFLCFHEI 72

Query: 69  GAHYTYAEVP--------LFDTIAQWMGSERNNYDKVGHFAQGFIPAMLAREIMLRNQAV 120
           G+HYTY+ VP            +  W G ERN+YD+  H A G + A   REI +R   V
Sbjct: 73  GSHYTYSLVPYNQWTESVFGSPLNDWFGWERNHYDRFLHLAYGLLFAYPIREIFIRIVKV 132

Query: 121 KPGAWCAFLATCFVLAFSAFYELIEWWVAVA-TGEGAEAFLGTQGYVWDTQSDMFLALIG 179
           K G W  FL     L+ SA YELIEW  A+   G+   A+LGTQG VWD   DM LA +G
Sbjct: 133 K-GFWGYFLPLDLTLSTSAIYELIEWAAAIVFGGDVGAAYLGTQGDVWDAHKDMALAGLG 191

Query: 180 AIVALLSLS 188
           A++A+++++
Sbjct: 192 ALIAMVTVA 200