Pairwise Alignments

Query, 201 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 207 a.a., Predicted membrane protein from Kangiella aquimarina DSM 16071

 Score =  249 bits (636), Expect = 2e-71
 Identities = 116/200 (58%), Positives = 144/200 (72%), Gaps = 3/200 (1%)

Query: 2   NNKIA---WCGIYLSVLAWSAIKPADPFTWWLEALPALVAVPLLFFTRKRFELTPLVYFL 58
           NNK+A   W  I+++VL WS I P D  TW +E  PA++    L  T KRF LTPL+Y L
Sbjct: 3   NNKLAISIWISIFMAVLIWSGIGPKDRVTWMMEVAPAVIGFIALAITYKRFPLTPLLYVL 62

Query: 59  VLVHCCVLFVGAHYTYAEVPLFDTIAQWMGSERNNYDKVGHFAQGFIPAMLAREIMLRNQ 118
           +L+H  +L VG HYTYAEVPLFD + QW G ERNNYDK+GHF QGF+PA++ARE+M+R  
Sbjct: 63  ILIHSIILIVGGHYTYAEVPLFDDMKQWFGWERNNYDKLGHFVQGFVPAIIARELMIRLN 122

Query: 119 AVKPGAWCAFLATCFVLAFSAFYELIEWWVAVATGEGAEAFLGTQGYVWDTQSDMFLALI 178
                 W  F    F L FSAFYELIEWWVA+ + + AEAFLGTQGYVWDTQSDM+  L+
Sbjct: 123 VFNSAKWRTFFIISFCLGFSAFYELIEWWVALLSDQAAEAFLGTQGYVWDTQSDMWWCLL 182

Query: 179 GAIVALLSLSRVQDKQIAKL 198
           GA+VAL+SLS+  DKQ+ +L
Sbjct: 183 GAVVALVSLSKWHDKQLGRL 202