Pairwise Alignments

Query, 201 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 209 a.a., Inner membrane protein YjdF from Escherichia coli ECRC62

 Score =  199 bits (505), Expect = 4e-56
 Identities = 90/184 (48%), Positives = 125/184 (67%)

Query: 14  VLAWSAIKPADPFTWWLEALPALVAVPLLFFTRKRFELTPLVYFLVLVHCCVLFVGAHYT 73
           +L ++ I   D  TW +E  P ++ VPLL  T +R+ LTPL+Y L+ +H  +L VG  YT
Sbjct: 20  ILIYTGISAHDKLTWLMEVTPVIIVVPLLLATARRYPLTPLLYTLIFLHAIILMVGGQYT 79

Query: 74  YAEVPLFDTIAQWMGSERNNYDKVGHFAQGFIPAMLAREIMLRNQAVKPGAWCAFLATCF 133
           YA+VP+   + +W+G  RN YDK+GHF QG +PA++AREI++R   V+     AFL  C 
Sbjct: 80  YAKVPVGFEVQEWLGLSRNPYDKLGHFFQGLVPALVAREILVRGMYVRGRKMVAFLVCCV 139

Query: 134 VLAFSAFYELIEWWVAVATGEGAEAFLGTQGYVWDTQSDMFLALIGAIVALLSLSRVQDK 193
            LA SA YELIEWW A+A G+GA+ FLGTQG  WDTQSDMF AL+GA+  ++ L+R   +
Sbjct: 140 ALAISAMYELIEWWAALAMGQGADDFLGTQGDQWDTQSDMFCALLGALTTVIFLARFHCR 199

Query: 194 QIAK 197
           Q+ +
Sbjct: 200 QLRR 203