Pairwise Alignments

Query, 409 a.a., D-3-phosphoglycerate dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 322 a.a., Glycerate dehydrogenase from Xanthobacter sp. DMC5

 Score =  143 bits (361), Expect = 6e-39
 Identities = 98/287 (34%), Positives = 149/287 (51%), Gaps = 12/287 (4%)

Query: 44  DEALHESIKDAHFIGIRSRTQLSADVLKRAEKLIAIGCFCIGTNQVDLATAESLGIPVFN 103
           D+ L    + A  + +R++  L  DV + A+ +  +    +G + + +A A + GIPV N
Sbjct: 36  DDTLRRLTRAADAVIVRAK--LPDDVFEGADHVKGVVRHGVGLDFIPVAAATARGIPVAN 93

Query: 104 APFSNTRSVAELVLGEIIMLMRGIPERNAIAHRGGWMKTAA---GSYEVRGKTLGVIGYG 160
            P SNT++VAE V   +  L R +   +A     GW    A   G+ E+ G TLGVIG G
Sbjct: 94  LPGSNTQTVAEYVFSALFHLRRPLARIDARLRADGWNPARALGDGTSEIAGSTLGVIGLG 153

Query: 161 HIGTQLGILAET-LGMRVVFFDIEDKLPLGNAQQIHSMEQLLAQADVVSLHVPETPQTKD 219
            IG ++  +A   LGMRV+          G   ++  +E L AQ+D V +  P TPQTK 
Sbjct: 154 AIGQRVAAIARAGLGMRVIGASRSGAAVEG--VEVVDLETLFAQSDAVVIACPLTPQTKG 211

Query: 220 MISTAEFAAMRKGSIFINASRGTVVDIDALTVALKERHLAGAAIDVFPVEPQSNDDEFIS 279
           ++     A M+  ++ IN +RG +VD+DAL  ALK   +AGAA DV+   P   D    S
Sbjct: 212 LVDGRLLARMKHSAVLINPARGPIVDMDALLTALKAGWIAGAATDVYDTHPVPPD----S 267

Query: 280 PLRGLDNVLLTPHVGGSTAEAQENIGIEVAGKLAKYSDNGSTVSAVN 326
            L  L N+L+TPH+ G TA +   + I  A ++ +     +  + VN
Sbjct: 268 ALFDLPNLLMTPHLAGITATSMRAMSIGAAEEVLRILKGEAPKNLVN 314