Pairwise Alignments

Query, 409 a.a., D-3-phosphoglycerate dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 526 a.a., phosphoglycerate dehydrogenase from Magnetospirillum magneticum AMB-1

 Score =  188 bits (478), Expect = 3e-52
 Identities = 115/325 (35%), Positives = 181/325 (55%), Gaps = 15/325 (4%)

Query: 12  KILLLEGVHQSAVDVFERAGY-TNIEYHKASLGDEALHESIKDAHFIGIRSRTQLSADVL 70
           K+L+ + +  +AV +F+  G  T++   K  L  + L   I     + IRS T+++ ++L
Sbjct: 3   KVLISDKLSPAAVQIFKDRGIETDV---KTGLAPDELKAIIGQYDGLAIRSNTKVTTEIL 59

Query: 71  KRAEKLIAIGCFCIGTNQVDLATAESLGIPVFNAPFSNTRSVAELVLGEIIMLMRGIPER 130
             A  L  +G   IG + VD+  A + GI V N PF N+ + AE  +  +  L R IPE 
Sbjct: 60  AAATNLKVVGRAGIGVDNVDVPAATARGIVVMNTPFGNSITTAEHAIAMMFALAREIPEA 119

Query: 131 NAIAHRGGWMKTAAGSYEVRGKTLGVIGYGHIGTQLGILAETLGMRVVFFDIEDKLPLGN 190
           NA  H G W K      E+ GK LG++G G+IG  +   A+ L MRV+ +D    L +  
Sbjct: 120 NASTHAGKWEKNRFMGVELTGKVLGIVGCGNIGAIVADRAQGLRMRVIAYD--PFLSVER 177

Query: 191 AQQIH----SMEQLLAQADVVSLHVPETPQTKDMISTAEFAAMRKGSIFINASRGTVVDI 246
           A++++     +++L  +AD ++LH P T  T+++I     A M+KG   IN +RG +V  
Sbjct: 178 AKELNVEKVELDELFPRADFITLHTPLTDATRNIIDAKAMAKMKKGVRIINCARGGLVVE 237

Query: 247 DALTVALKERHLAGAAIDVFPVEPQSNDDEFISPLRGLDNVLLTPHVGGSTAEAQENIGI 306
           + L  AL+   +AGAA+DVF  EP   +  F +P      V+ TPH+G ST+EAQEN+ +
Sbjct: 238 EDLLAALESGQVAGAALDVFKTEPAKENALFGNP-----KVVCTPHLGASTSEAQENVAL 292

Query: 307 EVAGKLAKYSDNGSTVSAVNFPEVS 331
           +VA ++A Y   G+  +A+N P VS
Sbjct: 293 QVAEQMADYLLTGAVTNALNIPSVS 317



 Score = 32.0 bits (71), Expect = 4e-05
 Identities = 19/92 (20%), Positives = 43/92 (46%), Gaps = 2/92 (2%)

Query: 319 GSTVSAVNFPEVSLPMHKGTSRLLHIHQNRPGVLIKINKAFSEKGINIAAQYLQTTAEIG 378
           G+    V    +S+    G + L   +Q++PG +  +       G+NIA  +L  +   G
Sbjct: 432 GNKARVVEIKGISIEAELGQNMLYVTNQDKPGFIGALGSLLGANGVNIATFHLGRSEAGG 491

Query: 379 YVVM--EVDTHQAEEALVELKAIDGTLRTRVL 408
             ++  +VD   + + L +++A+   ++ + L
Sbjct: 492 DAILLTQVDQPVSNDLLEKVRALPQVVQAKFL 523