Pairwise Alignments

Query, 409 a.a., D-3-phosphoglycerate dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 349 a.a., D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding from Agrobacterium fabrum C58

 Score =  133 bits (334), Expect = 9e-36
 Identities = 79/293 (26%), Positives = 144/293 (49%), Gaps = 9/293 (3%)

Query: 19  VHQSAVDVFERAGYTNIEYHKASLGDEALHESIKDAHFIGIRSRT-QLSADVLKRAEKLI 77
           +++ AV +    GY  + Y      +  L   + +   +G+  R  + S   +K A  L 
Sbjct: 32  INEQAVKLITDNGY-QVSYVPPYTSEADLVRIVTELDPVGVVVRMGRFSEAAIKAAPSLR 90

Query: 78  AIGCFCIGTNQVDLATAESLGIPVFNAPFSNTRSVAELVLGEIIMLMRGIPERNAIAHRG 137
            +    +G + +D+  A    IPV  A  +N  SVAE  +  +  +++ I   ++    G
Sbjct: 91  VLSKHGVGVDNIDVDAASRREIPVVVAAGANALSVAEHAITLLFAVVKRIVPLDSGIRAG 150

Query: 138 GWMKTAAGSYEVRGKTLGVIGYGHIGTQLGILAETLGMRVVFFDI---EDKLPLGNAQQI 194
            W K      E+ G  +G++G+G I  Q  + A   G++V  +D    E         ++
Sbjct: 151 RWEKAGYSGKELAGMIIGLVGFGAIARQTAVFARGFGLKVQAYDPFTDETAFVEAGVHRV 210

Query: 195 HSMEQLLAQADVVSLHVPETPQTKDMISTAEFAAMRKGSIFINASRGTVVDIDALTVALK 254
             ++ L++ +D++SLH P TP T++++       M+ GS  IN +RG ++D DAL  A++
Sbjct: 211 ADVDDLISSSDILSLHCPLTPDTRNLLDDRRLGMMKPGSFIINTARGGLIDEDALLRAVE 270

Query: 255 ERHLAGAAIDVFPVEPQSNDDEFISPLRGLDNVLLTPHVGGSTAEAQENIGIE 307
             H+AGA +D F +EP + +  F         +++TPH+GG T EA   +G++
Sbjct: 271 SGHIAGAGLDTFQIEPPAANHPFWQN----QKIVVTPHIGGVTQEANVRVGVD 319