Pairwise Alignments

Query, 318 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 313 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  138 bits (348), Expect = 2e-37
 Identities = 105/302 (34%), Positives = 140/302 (46%), Gaps = 14/302 (4%)

Query: 24  LSHLGLIKVAGEQGRSFIHGQVTADISSLETNQWRWGAHCDPKGKMLASFRTFTIKDALL 83
           LSH G++ V G     F+ GQ+T +I+ L       GA C  KG+M +SFR     +  L
Sbjct: 10  LSHEGILAVRGSDAGKFLQGQLTCNINYLSQEHASLGARCMVKGRMQSSFRIVPEGNGYL 69

Query: 84  LLMPKDTIEVDLPQLQKYAVFSKATLSNASEEWCLLGVAGEQANQFVTQHFGEVAQELTL 143
           L M  + ++  L  L+KYAVFSKATL++ S  W   G+ G  A           A   T+
Sbjct: 70  LAMASELLDAQLADLKKYAVFSKATLTDESTAWARFGLQGGDAALQALGLVVPAAAGSTV 129

Query: 144 TEHG--AILKDADRFILVL-----QP--QAASALIAEHTVFDASAWQALEIAAGYPNLAP 194
              G  AI   A R  L +     +P  QA +A + E T+ D   W   +I AG   +  
Sbjct: 130 RHDGLIAIAVSAGRVELWVPVADAEPVRQALAAALPEGTLND---WLLGQIRAGIGQVMG 186

Query: 195 SHANQYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTSLTINLET 254
                ++PQM NLQA++G+SF KGCY GQE VARM+Y G  KR  Y L            
Sbjct: 187 PTRELFIPQMINLQAVDGVSFKKGCYTGQEIVARMQYLGKLKRRQYRL--ALDQQAIPAP 244

Query: 255 SLEIALEDGYRKGGQIIEFVQRGNQVLLTAVLANDTENDAKLRFTEDEQSSLTVQPLPYS 314
             EI         G+++     G    L AVL+ +   D  L     E   L V  LPY 
Sbjct: 245 GAEIFSPTHGSSVGEVVIAAGNGTGCELLAVLSAEAVEDGHLHLGSLEGPRLQVLTLPYE 304

Query: 315 LD 316
           LD
Sbjct: 305 LD 306