Pairwise Alignments

Query, 318 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 333 a.a., tRNA-modifying protein YgfZ from Pectobacterium carotovorum WPP14

 Score =  194 bits (492), Expect = 3e-54
 Identities = 121/322 (37%), Positives = 179/322 (55%), Gaps = 19/322 (5%)

Query: 14  ASMPPLM-------LANLSHLGLIKVAGEQGRSFIHGQVTADISSLETNQWRWGAHCDPK 66
           AS PP         L +L    L+ + G     ++ GQVTAD+ +L  +     AHCD K
Sbjct: 13  ASQPPFASAQLAATLISLDDWALVTMVGPDTVKYLQGQVTADVGALPDDGHTLCAHCDAK 72

Query: 67  GKMLASFRTFTIKDALLLLMPKDTIEVDLPQLQKYAVFSKATLSNASEEWCLLGVAGEQA 126
           GKM ++ R F   +    +  ++  +  L +L+KYAVFSK T++   +   LLG AG   
Sbjct: 73  GKMWSNLRLFHHGEGFAFIERRNLRDAQLSELKKYAVFSKTTIA-PDDNAILLGAAGAGI 131

Query: 127 NQFVTQHFGEVAQ-ELTLTEH-GAIL----KDADRFILVLQPQAASALIAEH----TVFD 176
            + +   F ++   E  + +H GA L      A+RF+LVL P+ +++L+ +     ++ D
Sbjct: 132 RELLASVFSQLPDVEHPVVQHEGATLLHFAHPAERFLLVLSPEHSASLLEQLGDKVSLND 191

Query: 177 ASAWQALEIAAGYPNLAPSHANQYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNK 236
           +  W  L+I AG P +  +++ Q++PQ  NLQA+NGISF+KGCY GQE VAR KYRG NK
Sbjct: 192 SCQWLTLDIEAGQPIIDSANSAQFIPQATNLQALNGISFSKGCYTGQEMVARAKYRGANK 251

Query: 237 RALYILHGTTSLTINLETSLEIALEDGYRKGGQIIEFVQRGN-QVLLTAVLANDTENDAK 295
           RALY L G  +        LE+ L + +R+ G ++   Q  N  V + AVL ND   +  
Sbjct: 252 RALYWLAGKANKVPQAGDDLELQLGENWRRTGTVLAASQLQNGDVWVQAVLNNDLTAENV 311

Query: 296 LRFTEDEQSSLTVQPLPYSLDE 317
           LR  ED +S LTVQPLPY + +
Sbjct: 312 LRVREDAESQLTVQPLPYEITD 333