Pairwise Alignments

Query, 318 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 326 a.a., tRNA-modifying protein YgfZ from Dickeya dianthicola ME23

 Score =  209 bits (532), Expect = 7e-59
 Identities = 131/313 (41%), Positives = 178/313 (56%), Gaps = 16/313 (5%)

Query: 18  PLMLANLSHLGLIKVAGEQGRSFIHGQVTADISSLETNQWRWGAHCDPKGKMLASFRTFT 77
           P  L +L    L+ +AG     ++ GQ+TAD+ +L+ +Q    AHCD KGKM ++ R F 
Sbjct: 17  PATLISLDDWALVTLAGPDTVKYLQGQLTADVDALQASQHVLCAHCDAKGKMWSNVRLFH 76

Query: 78  IKDALLLLMPKDTIEVDLPQLQKYAVFSKATLSNASEEWCLLGVAGEQANQFVTQHFGEV 137
             D L  L  +   +  L +L+KYAVFSK T++ A +   LLG AG      +   F  +
Sbjct: 77  YGDGLAYLERRSVRDTQLAELKKYAVFSKTTIA-ADDNVVLLGAAGLDIRAQLAPLFDAL 135

Query: 138 --AQELTLTEHGAIL----KDADRFILVLQPQAASALI------AEHTVFDASAWQALEI 185
             A    + + GA L      A+RF+LVL+ Q A+ALI       +H   D+  WQAL+I
Sbjct: 136 PDADNAVVRQPGATLLYLPHPAERFLLVLEAQRAAALIETLQPRVQHN--DSRQWQALDI 193

Query: 186 AAGYPNLAPSHANQYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKRALYILHGT 245
           AAG P +  +++ Q++PQ  NLQA+ GISF KGCY GQE VAR KYRG NKRALY L GT
Sbjct: 194 AAGQPIIDSANSAQFIPQATNLQALQGISFTKGCYAGQEMVARAKYRGANKRALYWLAGT 253

Query: 246 TSLTINLETSLEIALEDGYRKGGQIIEFVQRGNQVL-LTAVLANDTENDAKLRFTEDEQS 304
            +        LE  L D +R+ G ++   Q  +  L + AVL ND E D  LR  +D  S
Sbjct: 254 GAQAPTAGDELEWKLGDNWRRTGTVLAASQLHDGTLWVQAVLNNDLEADNVLRVRDDSGS 313

Query: 305 SLTVQPLPYSLDE 317
            L +QPLPYSL+E
Sbjct: 314 QLAIQPLPYSLEE 326