Pairwise Alignments

Query, 318 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 326 a.a., tRNA-modifying protein YgfZ from Dickeya dadantii 3937

 Score =  208 bits (530), Expect = 1e-58
 Identities = 129/311 (41%), Positives = 176/311 (56%), Gaps = 12/311 (3%)

Query: 18  PLMLANLSHLGLIKVAGEQGRSFIHGQVTADISSLETNQWRWGAHCDPKGKMLASFRTFT 77
           P  L +L    L+ +AG     ++ GQ+TAD+ +L+  Q    AHCD KGKM ++ R F 
Sbjct: 17  PATLISLDDWALVTLAGPDTVKYLQGQLTADVDTLQAGQHVLCAHCDAKGKMWSNLRLFH 76

Query: 78  IKDALLLLMPKDTIEVDLPQLQKYAVFSKATLSNASEEWCLLGVAGEQANQFVTQHFGEV 137
             D L  L  +   +  L +L+KYAVFSK T++ A +   LLG  G      +   F  +
Sbjct: 77  YGDGLAYLERRSIRDTQLAELKKYAVFSKTTIA-ADDNVVLLGAVGLDIRAHLAPLFDAL 135

Query: 138 --AQELTLTEHGAIL----KDADRFILVLQPQAASALI----AEHTVFDASAWQALEIAA 187
             A    + + GA L      A+RF+LVL  Q A+ALI    +   + D+  WQAL+IAA
Sbjct: 136 PDADNAVVQQPGATLLHLAHPAERFLLVLDAQRAAALIETLSSSVKLNDSRQWQALDIAA 195

Query: 188 GYPNLAPSHANQYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTS 247
           G P +   ++ Q++PQ  NLQA+ GISF KGCY GQE VAR KYRG NKRALY L GT +
Sbjct: 196 GQPIIDSVNSAQFIPQATNLQALQGISFTKGCYAGQEMVARAKYRGANKRALYWLAGTGA 255

Query: 248 LTINLETSLEIALEDGYRKGGQIIEFVQRGNQVL-LTAVLANDTENDAKLRFTEDEQSSL 306
                   LE+ L D +R+ G ++   Q  +  L + AVL ND E D+ LR  +D  S L
Sbjct: 256 QAPAAGDELELKLGDNWRRTGTVLAASQLHDGTLWVQAVLNNDLEADSVLRVRDDSGSQL 315

Query: 307 TVQPLPYSLDE 317
            +QPLPYSL+E
Sbjct: 316 AIQPLPYSLEE 326