Pairwise Alignments

Query, 318 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 282 a.a., glycine cleavage system T protein, aminomethyltransferase from Agrobacterium fabrum C58

 Score = 57.8 bits (138), Expect = 3e-13
 Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 28/219 (12%)

Query: 22  ANLSHLGLIKVAGEQGRSFIHGQVTADISSLETNQWRWGAHCDPKGKMLASFRTFTIKDA 81
           A L+   LI+V+G     F++  +TADI +L   + R  A   P+GK+L  F  +  +D 
Sbjct: 4   AFLADRRLIRVSGTGAEEFLNNLITADIENLPEGETRASALLTPQGKILFDFLIW--RDG 61

Query: 82  LLLLMPKDTIEVD--LPQLQKYAVFSKATLSNASEEWCLLGVAGEQANQFVTQHFGEVAQ 139
              L+     E D  L +L  Y + +   L   + E   +GV            +G    
Sbjct: 62  RDYLVETGAAEQDALLRRLTMYKLRAPVELKAETVEG--IGV-----------FWGNSVT 108

Query: 140 ELTLTEHGAILKDADRFILVLQPQAASALIAEHTVFDASAWQALEIAAGYPNLAPSHANQ 199
           E  + +        D   L   P A+++        +A+A++AL +  G       +A Q
Sbjct: 109 EAGVRDGRFAKAGVD---LRRVPGASAS-------GEAAAYEALRVEHGIAESGRDYALQ 158

Query: 200 YV-PQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKR 237
              P    +   +G+SF KGC++GQE V+RMK+RG  +R
Sbjct: 159 DAFPHDVLMDVNDGVSFKKGCFVGQEVVSRMKHRGTARR 197