Pairwise Alignments

Query, 339 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 381 a.a., two-component system response regulator from Magnetospirillum magneticum AMB-1

 Score =  284 bits (727), Expect = 2e-81
 Identities = 154/352 (43%), Positives = 221/352 (62%), Gaps = 24/352 (6%)

Query: 4   KATILVVDDTPENIDILVGILGEDYKVKVAIDGPRALALVTKTLP-DLILLDVMMPGMNG 62
           + TILVVDDTP+N+ ++ G+L + Y+VK+A  G +ALA+     P DLILLD+MMP ++G
Sbjct: 6   RPTILVVDDTPDNLKLMSGLLKDLYRVKIANGGEKALAIAASDAPPDLILLDIMMPEVDG 65

Query: 63  YEVCKLLKQEPLTCHIPVIFVTALSEVADEAQGFALGAVDYITKPVSAPVVKARVKTHLA 122
           YEVC+ LK    T  IPVIF+TA+S   DE  G  +GAVDYITKP++  VV ARV+THL 
Sbjct: 66  YEVCRRLKASRATRDIPVIFLTAMSGSEDEEVGLKMGAVDYITKPITPAVVLARVETHLK 125

Query: 123 -------LYDQKRLLEQQVKERTQELEETRFEIIRRLGRAAEYKDNETGLHVVRMSHYAR 175
                  L D+   LE +V  RT+EL   +   I  +   AE +D++TG H+ R  +Y R
Sbjct: 126 LKASADFLRDKTAYLETEVTRRTRELAAIQDVTILAMASLAETRDSDTGNHIRRTQYYVR 185

Query: 176 LLAIKL--------GLPSTFCELLYNASPMHDIGKIGTPDAVLKKPGKLDAEEWKIMQQH 227
            LA+KL         L     ++L+ ++P+HDIGK+G PD +L KPG+ +  E++IM+ H
Sbjct: 186 ALALKLRDHPRFSSSLDDGVVDMLFKSAPLHDIGKVGIPDRILLKPGRFEPAEFEIMKTH 245

Query: 228 AVIGAEIIGEH-----GDPL--LQMARRIALTHHEKWDGTGYPNGLSEENIPIEGRIVAI 280
             +G + I EH     G P+  L MA+ IA  H EKWDG+GYP G+  ++IP+  R++A+
Sbjct: 246 TTLGRDAI-EHAEQSLGTPVAFLSMAKEIAYAHQEKWDGSGYPRGIGGDDIPVSARLMAV 304

Query: 281 ADVFDALTSQRPYKQPWTIEATMELLENQAGQHFDPKLVEEFKQILPEVIAI 332
           ADV+DAL S+R YK+       ++++   +G HFDP +VE F  +  E  AI
Sbjct: 305 ADVYDALISRRVYKEGMPHATAVQIIREGSGSHFDPDIVEAFLALEDEFKAI 356