Pairwise Alignments

Query, 339 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 339 a.a., two-component system response regulator from Magnetospirillum magneticum AMB-1

 Score =  266 bits (680), Expect = 6e-76
 Identities = 144/337 (42%), Positives = 204/337 (60%), Gaps = 18/337 (5%)

Query: 8   LVVDDTPENIDIL----VGILG-EDYKVKVAIDGPRALALVTKTLPDLILLDVMMPGMNG 62
           L++DD P N+ +L    + I G E   ++ A+D   ALA      PD+IL D MMPGM+G
Sbjct: 4   LLIDDNPTNLMLLKHRLIKIEGCEVVCMESALD---ALAWCEANTPDIILTDYMMPGMDG 60

Query: 63  YEVCKLLKQEPLTCHIPVIFVTALSEVADEAQGFALGAVDYITKPVSAPVVKARVKTHLA 122
            +  + +++      +PV+ VT         Q   LGA D++TKPV  P + AR +  LA
Sbjct: 61  LDFIRQVRRREEMQDVPVVVVTTSDVKEIRQQALDLGAADFLTKPVDGPELMARTRNLLA 120

Query: 123 LYDQKRLLEQQVKERTQELEETRFEIIRRLGRAAEYKDNETGLHVVRMSHYARLLAIKLG 182
           L   +  L  +  E          E++ RL +AAEY+D ETG H+ RM+ Y+ L+A ++G
Sbjct: 121 LRQSRLALHDRAAE----------ELVMRLSKAAEYRDPETGAHIERMARYSALIARRMG 170

Query: 183 LPSTFCELLYNASPMHDIGKIGTPDAVLKKPGKLDAEEWKIMQQHAVIGAEIIGEHGDPL 242
           LP+   E L  A+PMHD+GK+G PD +L KP +L   E+ IM+QHA+ G EI+ +    L
Sbjct: 171 LPNEAVERLELAAPMHDVGKVGIPDMILLKPDRLSETEFTIMKQHAMYGWEILKDSSSQL 230

Query: 243 LQMARRIALTHHEKWDGTGYPNGLSEENIPIEGRIVAIADVFDALTSQRPYKQPWTIEAT 302
           +++A  IA THHEK+DG+GYP GL+ + IP+EGRIVA+ADVFDALTS RPYK PW ++  
Sbjct: 231 VRLAALIARTHHEKFDGSGYPEGLAGDKIPLEGRIVAVADVFDALTSTRPYKTPWPVDKA 290

Query: 303 MELLENQAGQHFDPKLVEEFKQILPEVIAIRNTYFEH 339
              L  Q G HFDP  V+ F   L EV+ I+  + +H
Sbjct: 291 AAFLGEQKGCHFDPACVDAFLSDLGEVLRIKAQFLDH 327