Pairwise Alignments

Query, 339 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 390 a.a., HD domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  165 bits (417), Expect = 2e-45
 Identities = 91/221 (41%), Positives = 127/221 (57%), Gaps = 18/221 (8%)

Query: 110 APVVKARVKTHLALYDQKRLLEQQVKERTQELEETRFEIIRRLGRAAEYKDNETGLHVVR 169
           +P V  R++ +  L  Q  + E      T  + +   ++IR++      +D ETG H+ R
Sbjct: 154 SPPVVHRLRPYAELIAQIIMRELD----TVRMMQAAVKVIRQVSTV---RDEETGAHLAR 206

Query: 170 MSHYARLLAIKLG----LPSTFCELLYNASPMHDIGKIGTPDAVLKKPGKLDAEEWKIMQ 225
           M+ Y RL+A+KL     L   + E L+  +P+HD+GKI  PD +L KP +L  EE+ +M+
Sbjct: 207 MARYTRLIALKLAPQCCLTDEYVEYLFQFAPLHDLGKISVPDHILLKPARLTPEEFNVMK 266

Query: 226 QHAVIGAEII-------GEHGDPLLQMARRIALTHHEKWDGTGYPNGLSEENIPIEGRIV 278
            H   G EII       G    P   M R +   HHE  DG+GYP GL   +IP+E RI 
Sbjct: 267 GHVARGVEIIDLMVGDMGLQSLPHFHMLRNVIAYHHEAMDGSGYPYGLRGSDIPLEARIA 326

Query: 279 AIADVFDALTSQRPYKQPWTIEATMELLENQAGQHFDPKLV 319
           A+ADVFDALTS RPYK+ WT EA  +LL +QAG+ FDP+ V
Sbjct: 327 AVADVFDALTSARPYKEAWTNEAAFDLLRSQAGEKFDPQCV 367