Pairwise Alignments

Query, 339 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 392 a.a., two-component system response regulator from Magnetospirillum magneticum AMB-1

 Score =  305 bits (780), Expect = 2e-87
 Identities = 164/359 (45%), Positives = 231/359 (64%), Gaps = 24/359 (6%)

Query: 1   MMDKATILVVDDTPENIDILVGILGEDYKVKVAIDGPRALAL-VTKTLPDLILLDVMMPG 59
           ++++ATILVVDDTP+N+ +L  +L ++Y+VKVA  G +AL + + +T PDLILLD+MMPG
Sbjct: 6   VIERATILVVDDTPDNLAVLSSLLKDEYRVKVASSGEKALKVAMAETSPDLILLDIMMPG 65

Query: 60  MNGYEVCKLLKQEPLTCHIPVIFVTALSEVADEAQGFALGAVDYITKPVSAPVVKARVKT 119
           ++GYEVC+ LK EP T HIPVIF+TA +EV  E  G  LGAVDYITKP+S P+V ARVKT
Sbjct: 66  LDGYEVCRRLKAEPRTHHIPVIFLTAKAEVDAEKTGLDLGAVDYITKPISPPIVLARVKT 125

Query: 120 HLA-------LYDQKRLLEQQVKERTQELEETRFEIIRRLGRAAEYKDNETGLHVVRMSH 172
           HL        L D+   LE +V +RT+E+   +   I  +   AE +D ETG H+ R   
Sbjct: 126 HLKLKATADFLRDKNDFLEHEVAKRTEEVMAIQDVTILAMASLAETRDLETGNHIRRTQF 185

Query: 173 YARLLAIKLGLPSTFC--------ELLYNASPMHDIGKIGTPDAVLKKPGKLDAEEWKIM 224
           Y + LA +L     F         ++L+ ++P+HDIGK+G PD +L KPG+   EE++IM
Sbjct: 186 YVKALATRLRTHPRFAAHLDDGTIDMLFKSAPLHDIGKVGIPDRILLKPGRFVPEEFEIM 245

Query: 225 QQHAVIGAEIIGEHGD-------PLLQMARRIALTHHEKWDGTGYPNGLSEENIPIEGRI 277
           + H  +G E I EH +         L  A+ IA  H EKWDG+GYP GL+ ++IP+  R+
Sbjct: 246 KTHTTLGREAI-EHAEHSLGTKVEFLTTAKEIAFGHQEKWDGSGYPQGLAGDDIPLSARL 304

Query: 278 VAIADVFDALTSQRPYKQPWTIEATMELLENQAGQHFDPKLVEEFKQILPEVIAIRNTY 336
           +A+ADV+DAL S+R YK+    E  +E++    GQHFDP +V+ F  I  E  AI + +
Sbjct: 305 MAVADVYDALISRRVYKEGMPHEKAVEIIVQGRGQHFDPDIVDAFLAIQDEFRAIADEH 363