Pairwise Alignments

Query, 339 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 369 a.a., two-component system response regulator from Magnetospirillum magneticum AMB-1

 Score =  275 bits (702), Expect = 2e-78
 Identities = 153/358 (42%), Positives = 217/358 (60%), Gaps = 24/358 (6%)

Query: 2   MDKATILVVDDTPENIDILVGILGEDYKVKVAIDGPRALALVT-KTLPDLILLDVMMPGM 60
           MD+ATILVVDD+P+++ ++  +L  DY+VKVA  G R L +      PDL+LLDVMMP +
Sbjct: 7   MDRATILVVDDSPDDVWLMSELLKADYRVKVANSGERGLKIAMGNERPDLVLLDVMMPDI 66

Query: 61  NGYEVCKLLKQEPLTCHIPVIFVTALSEVADEAQGFALGAVDYITKPVSAPVVKARVKTH 120
           +GYEVC+ LK +  T  IPVIF+T+ + +A+E +G  +GAVDYITKP S  +V ARVK H
Sbjct: 67  DGYEVCRQLKTDSRTHDIPVIFLTSKTRMAEEKRGLDMGAVDYITKPFSPSIVLARVKAH 126

Query: 121 LA-------LYDQKRLLEQQVKERTQELEETRFEIIRRLGRAAEYKDNETGLHVVRMSHY 173
           L        L DQ R LE++V +RT+++   +   I  +   AE +D  TG H+ R  +Y
Sbjct: 127 LRLKSSADFLRDQNRFLEREVAKRTKDVTAVKDVTILAMASLAETRDLMTGNHIRRTQYY 186

Query: 174 ARLLAIKLG--------LPSTFCELLYNASPMHDIGKIGTPDAVLKKPGKLDAEEWKIMQ 225
              LA  L         L      +L+ ++P+HDIGKIG PD +L KPG+L  EE+++M+
Sbjct: 187 MSALATALQDHPRFAPLLDEAAITMLFKSAPLHDIGKIGIPDCILLKPGRLTPEEFEVMK 246

Query: 226 QHAVIGAEIIGEHGD-------PLLQMARRIALTHHEKWDGTGYPNGLSEENIPIEGRIV 278
            HA +G   I E  +         L MA+ I   HHE+WDG GYP GLS ++IP+  R++
Sbjct: 247 THAALGRNAI-ESAERWLGTRLEFLTMAKEITHYHHERWDGDGYPEGLSGDDIPVSARLM 305

Query: 279 AIADVFDALTSQRPYKQPWTIEATMELLENQAGQHFDPKLVEEFKQILPEVIAIRNTY 336
           A+ADV+DAL S+R YK+P      ++++    G  FDP +V+ F  I  E  AI   Y
Sbjct: 306 AVADVYDALISRRVYKEPIPHAEAVDIIIRDKGGRFDPDVVDAFVGIQDEFRAIARQY 363