Pairwise Alignments

Query, 339 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 428 a.a., HD-GYP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  140 bits (354), Expect = 5e-38
 Identities = 79/211 (37%), Positives = 118/211 (55%), Gaps = 2/211 (0%)

Query: 112 VVKARVKTHLALYDQKRLLEQQVKERTQELEETRFEIIRRLGRAAEYKDNETGLHVVRMS 171
           V+ + + T   L+   + L + + ER++ L       I  LG A   +D++T  H  R++
Sbjct: 183 VILSVLATSGLLFPVIKRLNRSLVERSRSLLHANLGAIEMLGNAIAKRDSDTSSHNYRVT 242

Query: 172 HYARLLAIKLGLPSTFCELLYNASPMHDIGKIGTPDAVLKKPGKLDAEEWKIMQQHAVIG 231
            YA  LA  L L +     L   + +HD+GK+  PDA+L KPGKLD  E+ IM+ H   G
Sbjct: 243 LYALRLAEALRLDAAHIRSLLKGAFLHDVGKLAIPDAILLKPGKLDDAEFAIMKTHITHG 302

Query: 232 AEIIGEHGDPLLQMARRIALTHHEKWDGTGYPNGLSEENIPIEGRIVAIADVFDALTSQR 291
            +++       L+ A  +   HHEK+DG+GY  GL+ + IP+  RI AIADVFDALTS+R
Sbjct: 303 LDLVQRFA--WLKDAAAVVGHHHEKYDGSGYMAGLAGDQIPLAARIFAIADVFDALTSKR 360

Query: 292 PYKQPWTIEATMELLENQAGQHFDPKLVEEF 322
           PYK+ + +     ++    G HFDP L+  F
Sbjct: 361 PYKEAFPVAQATAIMAAGRGSHFDPALLGLF 391