Pairwise Alignments

Query, 339 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 357 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  380 bits (975), Expect = e-110
 Identities = 190/336 (56%), Positives = 242/336 (72%), Gaps = 1/336 (0%)

Query: 4   KATILVVDDTPENIDILVGILGEDYKVKVAIDGPRALALVT-KTLPDLILLDVMMPGMNG 62
           K  +LVVDD+ +NI IL G+L + Y ++ A  G +ALAL   + +PDLILLDVMMP M+G
Sbjct: 7   KPIVLVVDDSADNIQILHGLLSDKYSIRAATSGAKALALAAIEPMPDLILLDVMMPEMDG 66

Query: 63  YEVCKLLKQEPLTCHIPVIFVTALSEVADEAQGFALGAVDYITKPVSAPVVKARVKTHLA 122
           ++ C  LK  PLT HIP+IFVTA +++ DE  GF LGAVDYI+KPV   +++ARVKTHL 
Sbjct: 67  FQTCIRLKHNPLTRHIPIIFVTAKTDIVDERTGFELGAVDYISKPVKPAILEARVKTHLT 126

Query: 123 LYDQKRLLEQQVKERTQELEETRFEIIRRLGRAAEYKDNETGLHVVRMSHYARLLAIKLG 182
           L  +   LE  V+ RTQELE  R++II +LGRAAE++DNETGLH++RMS Y  LLA K+ 
Sbjct: 127 LASRANQLESLVQLRTQELESARYKIIHKLGRAAEFRDNETGLHIIRMSQYGYLLARKID 186

Query: 183 LPSTFCELLYNASPMHDIGKIGTPDAVLKKPGKLDAEEWKIMQQHAVIGAEIIGEHGDPL 242
            P+ +C+L  +A+PMHDIGKIG PDAVL KPGKL AEE+ I+Q H  IGA+IIG+  DPL
Sbjct: 187 QPAHWCQLFLSAAPMHDIGKIGIPDAVLLKPGKLTAEEYIIIQTHPAIGAKIIGDDDDPL 246

Query: 243 LQMARRIALTHHEKWDGTGYPNGLSEENIPIEGRIVAIADVFDALTSQRPYKQPWTIEAT 302
           L MA+ IAL HHE+WDGTGYPNGLS++ IP+  RI  IADVFDALT+ R YK  W+I+  
Sbjct: 247 LVMAKEIALYHHERWDGTGYPNGLSQDQIPLCARIATIADVFDALTTPRTYKTAWSIDDA 306

Query: 303 MELLENQAGQHFDPKLVEEFKQILPEVIAIRNTYFE 338
              L + AG  FDP LV  F +   E+I I   + E
Sbjct: 307 FNYLRDGAGSQFDPLLVTAFLECKAEIIDICTQFAE 342