Pairwise Alignments

Query, 452 a.a., sodium:alanine symporter family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 480 a.a., Sodium/alanine symporter from Pseudomonas putida KT2440

 Score =  250 bits (638), Expect = 8e-71
 Identities = 154/434 (35%), Positives = 235/434 (54%), Gaps = 19/434 (4%)

Query: 6   LLSSLNGIVWGPITLCLLVGTGVYLTTRLKLIQVFRLPMALSLLFKPAKGH-GDLSSFAA 64
           +L  +N  + G + + L+VG G Y T R + +Q        S+  +  +G  G LSSF A
Sbjct: 1   MLEVINDFLSGKLLIVLIVGLGSYFTIRSRFVQFRHFTHMFSVFKESLRGQAGQLSSFQA 60

Query: 65  LCTALSATIGTGNIVGVATAIKMGGPGALFWMWLAAFFGMATKYAECMLAVKYRTTDARG 124
           L  +L+  +G GNI GV  A+ +GGPGA+FWMW+ A  GM++ + EC LA  Y+  D  G
Sbjct: 61  LMLSLAGRVGAGNIAGVGIAVTLGGPGAVFWMWVTALVGMSSSFFECTLAQVYKRADGDG 120

Query: 125 QIAGGPMYYIERGLGLRWMAKLFA---LFGVGVAFFGIGTFAQVNAISDALTIAFDVPTW 181
              GGP YYI+ GL  + MA +F+   L   G AF G+ ++   +++ +A   AFD    
Sbjct: 121 LYRGGPAYYIQHGLKRKSMAIVFSILLLVTYGFAFIGLQSYTVTHSLQNA--FAFDPS-- 176

Query: 182 TTALVLTLLVAAVTLGGVKRISNVAQKLVPAMSIGYVLACVWILLGFAEAILPALQLVVE 241
            T +VL +L+A   +GG+KRI+ V+  LVP  ++ Y+   ++++    E +   L+ + +
Sbjct: 177 HTGIVLAVLLAITFIGGIKRIAAVSDLLVPVKTLAYIGVTLYVIGTQIEHVPAMLETIFK 236

Query: 242 SAFTPVSAAGGFLGATVAQAIQMGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLVSMT 301
           SAF    A  G LG+    AI MG+ RGVF+NE+GLGSAP  AA A    P  QG+V   
Sbjct: 237 SAFGLDPAFAGLLGS----AIVMGVKRGVFANEAGLGSAPNVAAVAAVKHPGAQGVVQAF 292

Query: 302 GTFFDTIIICTMTGLVLIITGVWSGDTAGAAMTSAAFSLGGSAA-IGQYLVTIALVCFAF 360
             F DT +ICT T L+++++G ++    G  +     SL       G+  V++AL  F F
Sbjct: 293 SVFLDTFVICTCTALLILLSGFYTPGFEGDGIVLTQNSLAAVVGDWGRVFVSVALSLFVF 352

Query: 361 TTILGWHYYGERCWYYLVGER-GLRAYQIVFLGLIAGGAFIKLDVIWLLADTVNGLMAIP 419
           T IL  +Y GE    +L   R  L  ++ + L L+  G+   L  ++  AD     +A  
Sbjct: 353 TCILYNYYLGENSLQFLSRNRVVLMVFRGLVLALVVWGSMQDLSTVFAFADITMTCLAFV 412

Query: 420 NLIAI-----IGLR 428
           NL+A+     +GLR
Sbjct: 413 NLVALALLFKVGLR 426