Pairwise Alignments

Query, 452 a.a., sodium:alanine symporter family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 478 a.a., Putative ion:amino acid symporter from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  230 bits (586), Expect = 9e-65
 Identities = 144/452 (31%), Positives = 222/452 (49%), Gaps = 19/452 (4%)

Query: 7   LSSLNGIVWG-PITLCLLVGTGVYLTTRLKLIQVFRLPMALSLLFKPAKGHG-------- 57
           LS L   +WG P+ LC+ +G G Y T RL   Q+  L            G          
Sbjct: 5   LSQLFEFLWGGPLFLCV-IGIGFYFTVRLNFFQIINLKDIYRNTIGTLAGKNKQNTTGEV 63

Query: 58  ----DLSSFAALCTALSATIGTGNIVGVATAIKMGGPGALFWMWLAAFFGMATKYAECML 113
                L S     T LS ++G G I GVA AI +GGPGA+FWMW+ A  GM TK  E  L
Sbjct: 64  ASKKSLKSIEVAATVLSGSLGAGTIAGVAAAIAVGGPGAIFWMWIIAVVGMMTKMVEVTL 123

Query: 114 AVKYRTTDARGQIAGGPMYYIERGLGLRW--MAKLFALFGVGVAFFGIGTFAQVNAISDA 171
           AVKYR+    G+  GGPM+YI++GL  +W  +A L+A F + +       F Q N ++  
Sbjct: 124 AVKYRSKGENGEYYGGPMHYIKKGLNKKWHPLAGLYA-FALMILVITDACFVQTNTMAAV 182

Query: 172 LTIAFDVPTWTTALVLTLLVAAVTLGGVKRISNVAQKLVPAMSIGYVLACVWILLGFAEA 231
           +   FD+PT      + ++ A V L G+  +       +P ++I Y +    +++   EA
Sbjct: 183 IHYTFDIPTSVIGGFIVIVGALVILKGLSSLGKFCTIALPPITIAYFIGAAGVVVLNIEA 242

Query: 232 ILPALQLVVESAFTPVSAAGGFLGATVAQAIQMGIARGVFSNESGLGSAPIAAAAAKTNE 291
           I   ++ +   AF P  AAGGF+G+T+  AI  G +RG+F+NE+G+G++    A A  + 
Sbjct: 243 IPQVIKSIFYYAFAPAPAAGGFVGSTIMMAISKGASRGIFTNEAGMGTSATVHATANVDY 302

Query: 292 PVEQGLVSMTGTFFDTIIICTMTGLVLIITGVWS-GDTAGAAMTSAAFSLGGSAAIGQYL 350
              QG+      FF ++I C  T   ++ +G+W+     G  +  AA        I Q L
Sbjct: 303 AFRQGMWGAVEVFFVSMITCNFTAFAVLASGMWTDASYQGIQIIFAALKETWHPIIVQVL 362

Query: 351 VTIALVCFAFTTILGWHYYGERCWYYLVGERGLRAYQIVFLGLIAGGAFIKLDVIWLLAD 410
             + +    FT+ LG +        Y+ G++  R  + ++         +++ VIWL+AD
Sbjct: 363 -CLGVALILFTSYLGSYIKFRTSINYIFGDKLERIIKWLYFLPPLIAVNMEIPVIWLMAD 421

Query: 411 TVNGLMAIPNLIAIIGLRHIIIAETQSYFVRT 442
              G + IPN+IA+  LR   I+E   +  RT
Sbjct: 422 IAVGFLVIPNVIALFLLRKEFISEFNLFRTRT 453