Pairwise Alignments

Query, 452 a.a., sodium:alanine symporter family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 485 a.a., Putative alanine/glycine transport protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  292 bits (747), Expect = 2e-83
 Identities = 172/440 (39%), Positives = 252/440 (57%), Gaps = 13/440 (2%)

Query: 8   SSLNGIVWGPITLCLLVGTGVYLTTRLKLIQVFRLPMALSLLFKPAKGH--GDLSSFAAL 65
           S +N I+WG + + LL+G G + T R   IQ FR     S   K +     G L+SF AL
Sbjct: 15  SFINEILWGSVMIYLLLGAGCWFTWRTGFIQ-FRYIRQFSRSLKGSLSPQPGGLTSFQAL 73

Query: 66  CTALSATIGTGNIVGVATAIKMGGPGALFWMWLAAFFGMATKYAECMLAVKYRTTDARGQ 125
           CT+L+A IG+GN+ GVA AI  GGPGA+FWMW++A  GMAT +AEC LA  Y+  D  GQ
Sbjct: 74  CTSLAARIGSGNLAGVALAIAAGGPGAVFWMWVSAIIGMATSFAECSLAQLYKERDPTGQ 133

Query: 126 IAGGPMYYIERGLGLRWMAKLFALFGVGVAFFGIGTFAQVNAISDALTIAFDVPTWTTAL 185
             GGP +Y+ RGLG+RWM  +FALF + VA+  I    Q NA+S AL  AF++P   + +
Sbjct: 134 FRGGPAWYMARGLGMRWMGVVFALF-LLVAYGLIFNSVQANAVSRALHFAFNIPPLISGI 192

Query: 186 VLTLLVAAVTLGGVKRISNVAQKLVPAMSIGYVLACVWILLGFAEAILPALQLVVESAFT 245
            L      + + G+K ++ + Q L+P +++ +V   V+I L   E +   +  +V+SAF 
Sbjct: 193 ALAFCALLIIIRGIKGVARLMQWLIPLIALLWVAGSVFICLWHIEQMPGVIASIVKSAFG 252

Query: 246 PVSAAGGFLGATVAQAIQMGIARGVFSNESGLGSAPIAAAAAKT--NEPVEQGLVSMTGT 303
              AA G  G T+ QAI  G  RG+FSNE+G+GS P AAAAA +    PV QG+V M G 
Sbjct: 253 WQEAAAGAAGYTLTQAITSGFQRGMFSNEAGMGSTPNAAAAATSYPPHPVAQGIVQMIGV 312

Query: 304 FFDTIIICTMTGLVLIITGVWSGDTAGAA---MTSAAFSLGGSAAIGQYLVTIALVCFAF 360
           F DTIIICT + +++++ G  +  ++      +  A  SL G    G   V + ++ FAF
Sbjct: 313 FSDTIIICTASAMIILLAGNHASHSSTEGIQLLQHAMVSLTGE--WGASFVALIVILFAF 370

Query: 361 TTILGWHYYGERCWYY--LVGERGLRAYQIVFLGLIAGGAFIKLDVIWLLADTVNGLMAI 418
           ++I+  + Y E   ++  L   + +   ++  LG++  G  I   +IW LAD +   MAI
Sbjct: 371 SSIVANYIYAENNLFFLRLHNAKAIWLLRLATLGMVIAGTLISFPLIWQLADMIMACMAI 430

Query: 419 PNLIAIIGLRHIIIAETQSY 438
            NL AI+ L  ++      Y
Sbjct: 431 TNLTAILLLSPVVYTLASDY 450