Pairwise Alignments

Query, 452 a.a., sodium:alanine symporter family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 476 a.a., putative transporter from Escherichia coli BL21

 Score =  282 bits (721), Expect = 2e-80
 Identities = 169/444 (38%), Positives = 248/444 (55%), Gaps = 21/444 (4%)

Query: 8   SSLNGIVWGPITLCLLVGTGVYLTTRLKLIQV-FRLPMALSLLFKPAKGHGDLSSFAALC 66
           S +N ++WG + + LL G G + T R   +Q  +      SL        G L+SF +LC
Sbjct: 6   SFINSVLWGSVMIYLLFGAGCWFTFRTGFVQFRYIRQFGKSLKNSIHPQPGGLTSFQSLC 65

Query: 67  TALSATIGTGNIVGVATAIKMGGPGALFWMWLAAFFGMATKYAECMLAVKYRTTDARGQI 126
           T+L+A +G+GN+ GVA AI  GGPGA+FWMW+AAF GMAT +AEC LA  Y+  DA GQ 
Sbjct: 66  TSLAARVGSGNLAGVALAITAGGPGAVFWMWVAAFIGMATSFAECSLAQLYKERDANGQF 125

Query: 127 AGGPMYYIERGLGLRWMAKLFALF---GVGVAFFGIGTFAQVNAISDALTIAFDVPTWTT 183
            GGP +Y+ RGLG+RWM  LFA+F     G+ F GI    Q NA++ AL+ +FD P   T
Sbjct: 126 RGGPAWYMARGLGMRWMGVLFAVFLLIAYGIIFSGI----QANAVARALSFSFDFPPLVT 181

Query: 184 ALVLTLLVAAVTLGGVKRISNVAQKLVPAMSIGYVLACVWILLGFAEAILPALQLVVESA 243
            ++L +        G+  ++ + Q  VP M+I +VL  + I +     +   +  + ESA
Sbjct: 182 GIILAVFALLAITRGLHGVARLMQGFVPLMAIIWVLTSLVICVMNIGQLPHVIWSIFESA 241

Query: 244 FTPVSAAGGFLGATVAQAIQMGIARGVFSNESGLGSAPIAAAAAKT--NEPVEQGLVSMT 301
           F    AAGG  G T++QAI  G  R +FSNE+G+GS P AAAAA +    P  QG+V M 
Sbjct: 242 FGWQEAAGGAAGYTLSQAITNGFQRSMFSNEAGMGSTPNAAAAAASWPPHPAAQGIVQMI 301

Query: 302 GTFFDTIIICTMTGLVLIITGVWSGDT----AGAAMTSAAFS-LGGSAAIGQYLVTIALV 356
           G F DT++ICT + +++++ G  +G T     G  +   A   L GS   G   VT+ ++
Sbjct: 302 GIFIDTLVICTASAMLILLAG--NGTTYMPLEGIQLIQKAMRVLMGS--WGAEFVTLVVI 357

Query: 357 CFAFTTILGWHYYGERCWYY--LVGERGLRAYQIVFLGLIAGGAFIKLDVIWLLADTVNG 414
            FAF++I+  + Y E   ++  L   + +   +I     + GG  + L ++W LAD +  
Sbjct: 358 LFAFSSIVANYIYAENNLFFLRLNNPKAIWCLRICTFATVIGGTLLSLPLMWQLADIIMA 417

Query: 415 LMAIPNLIAIIGLRHIIIAETQSY 438
            MAI NL AI+ L  ++      Y
Sbjct: 418 CMAITNLTAILLLSPVVHTIASDY 441