Pairwise Alignments

Query, 223 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 228 a.a., putative ABC transporter - ATP binding subunit from Pseudomonas putida KT2440

 Score =  149 bits (376), Expect = 4e-41
 Identities = 85/197 (43%), Positives = 117/197 (59%), Gaps = 1/197 (0%)

Query: 10  VSKSFRDGEQRHTVLQAVDLTLHQGETIALTGPSGSGKSTLLNLIAGFETVDSGQIVLNH 69
           +SK     E   T+L A+ L L QG+++A+ G SGSGKSTLL L+AG +   +G ++L  
Sbjct: 11  LSKVVPSAEGDLTILHALSLDLAQGDSLAIVGASGSGKSTLLGLLAGLDRPSAGSVMLAG 70

Query: 70  QSTTKWQDRQWSEFRRTHLGVVFQQFNLLTPLNVKNNIGFSLYLNGD-SWNPWCDYLVEK 128
                  + Q +  R  H+G VFQ F LL  LN   N+   L L+G          L+E+
Sbjct: 71  HDLGPLDEDQRARVRAEHVGFVFQSFQLLDSLNALENVMLPLELDGRRDAREQARTLLER 130

Query: 129 LGLAALLNRQVEALSGGQQQRVAIARALAHNPSLLLADEPTGNLDDESGKQVMSLLCELA 188
           +GL   L+     LSGG+QQRVAIARA A  P++L ADEPTGNLD  +G+++  LL EL 
Sbjct: 131 VGLGKRLSHTPRQLSGGEQQRVAIARAFAAQPAVLFADEPTGNLDSHTGERISDLLFELN 190

Query: 189 KESQTSILMVTHSEECA 205
           KE  T++++VTH E  A
Sbjct: 191 KERGTTLVLVTHDERLA 207