Pairwise Alignments

Query, 425 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 352 a.a., putative ABC transporter lipoprotein from Pseudomonas putida KT2440

 Score =  257 bits (657), Expect = 3e-73
 Identities = 159/400 (39%), Positives = 216/400 (54%), Gaps = 52/400 (13%)

Query: 29  RLISQLIIGGLLLFMISGCDN-APASVSESKSMGALLGQTKEGETTSTQQAFAKVTPEHQ 87
           +L + L++ GLLL    GCD  AP S        A LGQ + GE       F++VT +H+
Sbjct: 2   KLSAWLLLSGLLL---CGCDQPAPQSY-------AGLGQ-QAGE-------FSQVTRDHR 43

Query: 88  FHFPQDHLAHNGFRQEWWYLTANLTTEKGEQLGAQWTQFRVALKPQYTESQNAQPTTLKS 147
             FP DH  H+GFR EWWY+TANL   +G   GAQWT FR AL+P         P T  S
Sbjct: 44  LVFPHDHGPHDGFRIEWWYVTANLKDAQGRDWGAQWTLFRSALRP--------GPET--S 93

Query: 148 AWATEQLYFAHSALTSSAAHLAHEKWSRGHPKLAGVNANPYQIHLDNWQLQSESNALFPA 207
            W +  L+  H+ALT+   H A E  +RG    AGV A P++  +++W LQ +       
Sbjct: 94  GWNSPNLWMGHAALTAPGGHQAAETLARGGIGQAGVQAQPFRAWINDWVLQGQGG--IEQ 151

Query: 208 ILRVETAD-FSYELTLTSQAPLQYQGDNGYSIKNREGNVASYYYSQPFITITGQITRHIN 266
           +  V + D F Y+L L S  PL   G+ GYS K+ +G  ASYYYSQPF  + GQ+     
Sbjct: 152 LQMVASGDGFRYDLQLHSDLPLVLHGEQGYSEKSGKGQ-ASYYYSQPFYQVQGQV----- 205

Query: 267 INGQAENRVEKVTGQGWLDREWSSQFLTKSQQGWDWFALRLNDGSALMLFQLREQSTDKT 326
              Q  +    VTGQ WLDREWSSQ L   Q GWDWF+L L+ G+ LMLFQ+RE   +  
Sbjct: 206 ---QRGSLCIAVTGQAWLDREWSSQPLAPGQTGWDWFSLHLDSGAKLMLFQVREAHGEPY 262

Query: 327 QTPSAFYSARRMFADGTGRNINSRDTPDGIKMTPLGWQTTRTGK-YPVSWQVQIPSEQID 385
           +  +           G   ++ + D    IK+  L W   + GK  P  W+VQ+P   +D
Sbjct: 263 RAGTWV---------GPQGDVVALDAAQ-IKLQALAWSAQKNGKQVPTRWRVQVPEHGVD 312

Query: 386 IRISPLNPNSAMALSTSYWEGPIKLSGSHTGMGYMELTGY 425
           +++  + P + M     YWEGP++L GS  G GY+E+TGY
Sbjct: 313 VQVDAVEPQAWMQTRFPYWEGPVRLKGSAGGRGYLEMTGY 352