Pairwise Alignments

Query, 123 a.a., type IV pilin, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 129 a.a., Type IV pili biogenesis protein PilE from Pseudomonas putida KT2440

 Score = 70.9 bits (172), Expect = 6e-18
 Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 9/127 (7%)

Query: 4   LQKGFTLIELMIAVAIIGILAAIAIPSFNEYLKQGRRFDAQQYLVTSAQALERHYSRNGL 63
           +Q+G +LIEL+I +A+ GILAAIA PS+++ L++  R +    L  +A  LERH  R G 
Sbjct: 1   MQQGLSLIELLIVLAVTGILAAIAYPSYSDQLRRAARSEVVGLLHDAALRLERHRVRTGQ 60

Query: 64  YPASQSL--ANSPYYSFSYTPTADKFGFSLKAVPTNRQS-DPCGTLSLDHKGVR------ 114
           Y     +    + YYS      +D F    + +P    + D CG   LD  GV+      
Sbjct: 61  YAEGDLVLPEGTRYYSLQAQRDSDTFTLRARRLPHGLMAQDGCGDFQLDQAGVQHNPGAV 120

Query: 115 VPATNCW 121
             +T+CW
Sbjct: 121 EHSTHCW 127