Pairwise Alignments

Query, 123 a.a., type IV pilin, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 141 a.a., Type IV pilus biogenesis protein PilE from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 68.2 bits (165), Expect = 4e-17
 Identities = 47/133 (35%), Positives = 69/133 (51%), Gaps = 19/133 (14%)

Query: 6   KGFTLIELMIAVAIIGILAAIAIPSFNEYLKQGRRFDAQQYLVTSAQALERHYSRNGLYP 65
           +GFTLIE+MI VAIIGILAA+A+P++  Y+ +  R  A   L   AQ +ER Y+ +  Y 
Sbjct: 10  RGFTLIEMMITVAIIGILAAVALPNYRSYVLRTNRAVATGCLQEMAQHMERRYTTSMAYN 69

Query: 66  ASQSLAN-------SPYYSFSYT---PTADKFGFSLKAVPTNRQSD--PCGTLSLDHKGV 113
           A   L         +  YSF++    PTA    + ++A+P   Q+    C TL L  +G 
Sbjct: 70  APAGLPALACTNEVATRYSFAFADGQPTATT--YRIEAIPQGPQAPDAQCATLGLTQQGT 127

Query: 114 R-----VPATNCW 121
           +         +CW
Sbjct: 128 KSISGTASVNDCW 140