Pairwise Alignments

Query, 319 a.a., iron-sulfur cluster-binding protein napH (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 287 a.a., quinol dehydrogenase membrane component (NCBI) from Escherichia coli BW25113

 Score =  299 bits (766), Expect = 5e-86
 Identities = 135/279 (48%), Positives = 194/279 (69%), Gaps = 2/279 (0%)

Query: 8   RTQNEHAAAIAELGWFGAHKYLLLRRTVQLSLLGLFALGPLLGIWLFKGNLSASLLLDTI 67
           R ++    A+ + GW+ +H++L+LRR  Q  +LG+F  GP  G+W+  GN S+SLL DT+
Sbjct: 4   RKRDAGREALEKKGWWRSHRWLVLRRLCQFFVLGMFLSGPWFGVWILHGNYSSSLLFDTV 63

Query: 68  PFADPLVSLQLLLAGHTPELSLLIGAGLVTAFYALAGGRVFCSWVCPVNLVTDTASWLRR 127
           P  DPL++LQ L +GH P    L GA ++T  YALAG R+FCSWVCP+N +TD A+WLRR
Sbjct: 64  PLTDPLMTLQSLASGHLPATVALTGAVIITVLYALAGKRLFCSWVCPLNPITDLANWLRR 123

Query: 128 KLKLPRTSELPRNLRYYLLALVLLLPLLTGSLIWEWVNPVPLVYRAVLFGSLSGLWILAA 187
           +  L +++ +PR++RY LL ++L+   LTG+LIWEW+NPV L+ R+++ G  SG  ++ A
Sbjct: 124 RFDLNQSATIPRHIRYVLLVVILVGSALTGTLIWEWINPVSLMGRSLVMGFGSGALLILA 183

Query: 188 IFLLDLFIAERAWCGHLCPTGALFGLVGKWSPIKIVASKASACDNCMDCFAVCPERQVLK 247
           +FL DL + E  WCGH+CP GAL+G++G    I + A+    C+ CMDCF VCPE  VL+
Sbjct: 184 LFLFDLLVVEHGWCGHICPVGALYGVLGSKGVITVAATDRQKCNRCMDCFHVCPEPHVLR 243

Query: 248 -PALKGQSPV-ISSPDCTQCGRCIDVCAQRVFRYRTRFT 284
            P L  QSPV ++S DC  CGRC+DVC++ VF   TR++
Sbjct: 244 APVLDEQSPVQVTSRDCMTCGRCVDVCSEDVFTITTRWS 282