Pairwise Alignments

Query, 293 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 293 a.a., transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  154 bits (390), Expect = 2e-42
 Identities = 99/290 (34%), Positives = 149/290 (51%), Gaps = 7/290 (2%)

Query: 6   KTLQCFLTLVETENFTRAAQKCFITQPTLSKIIQRLEESLGETLLIRNNQKVELTQAGQL 65
           K L+ F+ +V    FT+AAQ   I+Q  +SK + +LE+ +G+ LL R    + LT AG++
Sbjct: 4   KQLRSFIEVVHRGGFTQAAQTLHISQSAVSKQVAQLEQDVGQPLLERQASHLHLTAAGRI 63

Query: 66  FEHSAREILGQWHRLQEDMSNLSGLKSGRLRLGVCPMMSS--LIIGLLTSYRKRYPGVEL 123
                  +L Q   L  ++ +LS ++ G LRLG+ PM+ S  L  GL   YR+R+P + +
Sbjct: 64  VLERGEALLRQRQALLNELDDLSQMERGELRLGL-PMLGSDTLFAGLFAEYRRRHPNIAI 122

Query: 124 QMYEYGGFGCEQALLNNSLDIAFTALPTTHETELINQPLTKYPLLACLPEAHPLAAKSYL 183
           Q+ E G    EQA+ +  L++     PT    +   QP    PL A LP  H LA    +
Sbjct: 123 QLLEGGSRSVEQAVRSGELELGGCLTPTDEAFDY--QPFCNEPLDALLPAGHALAGLDAV 180

Query: 184 SWQDFEPYPFILYNEDFSLAKLINRLSRKAGVQLNIAFRSGQWDFLATMVEADMGLAILP 243
                   PF+LY   F L   + +  ++ G       RSGQ DFLA +V A  G+ +LP
Sbjct: 181 GLGQLADTPFLLYQRSFVLNDRLLKACQQQGFTPKEGGRSGQADFLAALVAAGQGVVMLP 240

Query: 244 EPICQKLSNSKLVFRPM--QPALTWDLALIWRQNLPLTPAANALLELSKQ 291
             + + L    +V  P+  Q  L WD+A IWR+   L+ AA A L L ++
Sbjct: 241 RVVAKVLERPGVVRVPLHAQEDLRWDIAFIWRRGAYLSRAAQAWLALLRE 290