Pairwise Alignments

Query, 293 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 297 a.a., LysR family transcriptional regulator from Dickeya dianthicola ME23

 Score =  113 bits (283), Expect = 5e-30
 Identities = 81/275 (29%), Positives = 133/275 (48%), Gaps = 4/275 (1%)

Query: 5   IKTLQCFLTLVETENFTRAAQKCFITQPTLSKIIQRLEESLGETLLIRNNQKVELTQAGQ 64
           ++ L+ F+ +  T +FTRAA+   I+QP LS+ IQ+LE  +G  L  R  + VE+T+AG+
Sbjct: 3   LRYLRYFVAVASTRHFTRAAESLGISQPPLSQQIQKLEREIGTPLFKRLTRGVEMTEAGE 62

Query: 65  LFEHSAREILGQWHRLQEDMSNLSGLKSGRLRLGV-CPM-MSSLIIGLLTSYRKRYPGVE 122
                A  IL       E + +++  +SG + +G  C +     ++ LL  YR+ YP V 
Sbjct: 63  ALYQDASHILELTDSAVERVRSIARGESGAINVGFSCAVTFHPAVLTLLRRYRQHYPSVR 122

Query: 123 LQMYEYGGFGCEQALLNNSLDIAFTALPTTHETELINQPLTKYPLLACLPEAHPLAAKSY 182
           LQ  E       ++L N + DIAF  LP     E   + L   P+   LPE HP   ++ 
Sbjct: 123 LQPREEHIHEILESLRNRTTDIAFVRLPGDIGEEFEGELLADEPMRLVLPENHPFGDQTR 182

Query: 183 LSWQDFEPYPFILYNEDF--SLAKLINRLSRKAGVQLNIAFRSGQWDFLATMVEADMGLA 240
           ++ +     P I++  +   SL  LI R    +G Q  I   +       +MV +  G+ 
Sbjct: 183 INLEQLRHEPLIIFPRELCPSLHDLIVRACYLSGYQPKINPLAPHITATISMVASGFGVT 242

Query: 241 ILPEPICQKLSNSKLVFRPMQPALTWDLALIWRQN 275
            +PE +    + +        P LT  +A+IWR++
Sbjct: 243 FVPESLASIQTGNVTYHDTNTPHLTTQIAVIWRKH 277