Pairwise Alignments

Query, 489 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 684 a.a., DeoR faimly transcriptional regulator from Pseudomonas simiae WCS417

 Score =  105 bits (261), Expect = 7e-27
 Identities = 70/208 (33%), Positives = 108/208 (51%), Gaps = 13/208 (6%)

Query: 288 LLATRTFFISRYNRRLTDKNEQLEALRLRLEHTNAELEFLSTH----------DPLTKLY 337
           LL T      + ++R  +   +L+ L  R+ +   E +    H          DPLT L 
Sbjct: 474 LLGTMDEHQQQRDQREQETAARLKGLAERVANMEQEAQGYREHLEVQRQKALIDPLTGLP 533

Query: 338 NRHYFNRQFVHEHRSEISSEGAICLVMLDIDFFKEINDTLGHAVGDNILMELSGVLQHCV 397
           NR  ++ +   E  +      ++ L MLD+D FK IND  GH  GD +L  ++ VL+  +
Sbjct: 534 NRAAWSERLDQEVNTWHQRGDSLSLAMLDLDHFKRINDGYGHLAGDKVLKIIANVLRKRL 593

Query: 398 RETDVVARWGGEEFVILCHQTSIDLVKTLCQRIAAAIK--DYRFSGN-VQLTCSFGIAKL 454
           R TD +AR+GGEEFV+L   +S+       + + AAI+   + F G  V +T S G+A+ 
Sbjct: 594 RSTDFIARFGGEEFVLLMPDSSLTDALAAGEVLRAAIEACPFHFKGEPVTITVSMGVAQF 653

Query: 455 VNNEPMQSCFERADKALYQAKALGRNQI 482
              E      +RAD+ALY+AKA GRN++
Sbjct: 654 QPGERSDLALKRADEALYRAKAAGRNRV 681