Pairwise Alignments

Query, 303 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 324 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  164 bits (415), Expect = 3e-45
 Identities = 92/294 (31%), Positives = 157/294 (53%), Gaps = 1/294 (0%)

Query: 1   MPDLNGMMLFAAVVRAKGFSQAARETGHPKSTISRKIAQLEEELGVRLLQRDTRNLSLTQ 60
           M  +  + LF  VV    FS+AA E    +   +++IA++E+E+G RLL R T  ++ T+
Sbjct: 1   MDRIQALRLFTRVVDLGSFSRAATEMRIGQPAATKQIARMEKEVGARLLHRSTHGVTPTE 60

Query: 61  VGALFYQHCDSIRNEVEAAKAVIESTHDDVSGSLRIAIPVSFSQELIANLCSGFMRLYPN 120
           VG L+Y+ C  I +  E A++V       + GSLRI+  ++F + ++A +   FMR +P 
Sbjct: 61  VGNLYYEKCKLIVHHDEEARSVATLMQSQIQGSLRISTSIAFGRRVLAPMVLDFMRTHPR 120

Query: 121 VELDVQFTDNDIGLVGEGYDIAIKYGPLQSSDLVARLLFERQPILVASPGYLKTRGTPAT 180
           + +D+ F D  + LV +G D+AI+ G L  S L A  L     + VA+P YL++ G PA 
Sbjct: 121 LLIDLSFDDRYVNLVEQGVDVAIRMGRLADSTLGATYLGFSPWVAVAAPAYLQSHGVPAK 180

Query: 181 PKELSDHSGILLGTSRSAPIWPL-GKGTRKTMVSFQRKVRVNSPIMVKQLALDDFGIAML 239
           P +L  H  ++  T++   IW   G       ++   ++R N+   +   A D FG+A+L
Sbjct: 181 PNDLLAHDALVYSTAQGDAIWHFTGAHEESLAIAVNGRLRSNNLSALLGAARDGFGVAVL 240

Query: 240 SNSACKTELANGQLVPILQEWPMEPFKVYGVYSSRRQLATNISAFLDFFVKRFS 293
            +      L  G++V IL +W ++  +V+ VY S R +   +   + +   RF+
Sbjct: 241 PHYVASDGLRCGEIVSILDDWKLQGQEVHAVYPSPRMVPAKVQELVVWLQARFT 294