Pairwise Alignments

Query, 303 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 300 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  157 bits (397), Expect = 3e-43
 Identities = 97/299 (32%), Positives = 151/299 (50%), Gaps = 10/299 (3%)

Query: 1   MPDLNGMMLFAAVVRAKGFSQAARETGHPKSTISRKIAQLEEELGVRLLQRDTRNLSLTQ 60
           M DLN +  FA VV A GF+ A R+ G PKS +SR+IA+LEE LG RLLQR TR L LT 
Sbjct: 1   MQDLNDLFYFARVVEAGGFAAAGRQLGIPKSRLSRRIAELEERLGTRLLQRTTRQLKLTA 60

Query: 61  VGALFYQHCDSIRNEVEAAKAVIESTHDDVSGSLRIAIPVSFSQELIANLCSGFMRLYPN 120
           VG  +  HC ++  E EAA   + S   +  G LR++ PV+ +   + ++ S F+  YP 
Sbjct: 61  VGERYLHHCQAMLLEAEAADETVASMSSEPRGRLRVSCPVALAHAFLPDVISRFLEQYPL 120

Query: 121 VELDVQFTDNDIGLVGEGYDIAIKYGPLQSSD--LVARLLFERQPILVASPGYLKTRGTP 178
           V+LD+   +  + L+ EG D+A++   L   D  LV R L + Q  LVA+PG+      P
Sbjct: 121 VQLDMVLLNRRVDLISEGIDVALRVRDLGDEDPALVTRRLRQAQMQLVAAPGFADHIREP 180

Query: 179 ATPKELSDHSGILLGTS---RSAPIWPLGKGTRKTMVSFQRKVRVNSPIMVKQLALDDFG 235
                L      +LG +   R       G   ++  ++ + ++ ++  ++         G
Sbjct: 181 GELASLP-----VLGAAEADRLVHFRLFGPHGKQQEIALEPRLAIDDFVVRNAAVRAGLG 235

Query: 236 IAMLSNSACKTELANGQLVPILQEWPMEPFKVYGVYSSRRQLATNISAFLDFFVKRFSS 294
              L +  C+ EL  G+LV +L +W +    +  VY  RR L   +  ++D     F +
Sbjct: 236 FTALPSMFCEEELERGELVRLLPDWSLPGGYLQAVYPHRRGLLPAVRVWIDHLAASFEA 294